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A reaction that illustrates an enzyme cleaving a specific bond of the reactant in order to create two products Bond specificity, unlike group specificity, recognizes particular chemical bond types. This differs from group specificity, as it is not reliant on the presence of particular functional groups in order to catalyze a particular reaction ...
To use FMO theory, the reaction should be considered as two separate ideas: (1) whether or not the reaction is allowed, and (2) which mechanism the reaction proceeds through. In the case of a [1,5] shift on pentadiene, the HOMO of the sigma bond (i.e., a constructive bond) and the LUMO of butadiene on the remaining 4 carbons is observed.
A primary kinetic isotope effect (PKIE) may be found when a bond to the isotopically labeled atom is being formed or broken. [3] [4]: 427 Depending on the way a KIE is probed (parallel measurement of rates vs. intermolecular competition vs. intramolecular competition), the observation of a PKIE is indicative of breaking/forming a bond to the isotope at the rate-limiting step, or subsequent ...
Such reactions require the addition of energy in the form of heat or light. A typical example of a unimolecular reaction is the cis–trans isomerization, in which the cis-form of a compound converts to the trans-form or vice versa. [15] In a typical dissociation reaction, a bond in a molecule splits (ruptures) resulting in two molecular fragments.
Protein folding problem: Is it possible to predict the secondary, tertiary and quaternary structure of a polypeptide sequence based solely on the sequence and environmental information? Inverse protein-folding problem: Is it possible to design a polypeptide sequence which will adopt a given structure under certain environmental conditions?
An isodesmic reaction is a chemical reaction in which the type of chemical bonds broken in the reactant are the same as the type of bonds formed in the reaction product. This type of reaction is often used as a hypothetical reaction in thermochemistry. An example of an isodesmic reaction is CH 3 − + CH 3 X → CH 4 + CH 2 X − (1) X = F, Cl ...
In biochemistry, hydroxylation reactions are often facilitated by enzymes called hydroxylases. These enzymes insert an O atom into a C−H bond. Typical stoichiometries for the hydroxylation of a generic hydrocarbon are these: 2R 3 C−H + O 2 → 2 R 3 C−OH R 3 C−H + O 2 + 2e − + 2H + → R 3 C−OH + H 2 O
In organic chemistry, an addition reaction is an organic reaction in which two or more molecules combine to form a larger molecule called the adduct. [1] [2] An addition reaction is limited to chemical compounds that have multiple bonds. Examples include a molecule with a carbon–carbon double bond (an alkene) or a triple bond (an alkyne).