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Name Description Knots [Note 1]Links References trRosettaRNA: trRosettaRNA is an algorithm for automated prediction of RNA 3D structure. It builds the RNA structure by Rosetta energy minimization, with deep learning restraints from a transformer network (RNAformer). trRosettaRNA has been validated in blind tests, including CASP15 and RNA-Puzzles, which suggests that that the automated ...
Rosetta@home is a distributed computing project aimed at protein structure prediction and is one of the most accurate tertiary structure predictors. [210] [211] The conformational states from Rosetta's software can be used to initialize a Markov state model as starting points for Folding@home simulations. [25]
Quantitative structure–activity relationship models (QSAR models) are regression or classification models used in the chemical and biological sciences and engineering. Like other regression models, QSAR regression models relate a set of "predictor" variables (X) to the potency of the response variable (Y), while classification QSAR models ...
Mondrian OLAP server is an open-source OLAP server written in Java. It supports the MDX query language, the XML for Analysis and the olap4j interface specifications. Apache Doris is an open-source real-time analytical database based on MPP architecture. It can support both high-concurrency point query scenarios and high-throughput complex ...
Open source software for Smith-Waterman protein database searches on GPUs: Parallel search of Smith-Waterman database: 10–50x: T 2075, 2090, K10, K20, K20X: Yes: Available now, version 2.0.8 CUSHAW: Parallelized short read aligner: Parallel, accurate long read aligner – gapped alignments to large genomes: 10x: T 2075, 2090, K10, K20, K20X: Yes
An Australian computer scientist who claimed he invented bitcoin was on Friday accused of contempt of court after he filed a 911 million-pound ($1.18 billion) lawsuit against Twitter founder Jack ...
Jakarta Server Pages: Dynamic pages running Web servers using Java technology JUMP Beyond Jump save file Cell to Singularity: JVX JavaView 3D geometry format. The native format of the JavaView visualization software. Used for the visualization of 2D or 3D geometries. Can be embedded in web pages and viewed with the JavaView applet. [69] JXL
Part of the myosin II structure. Atoms in the heavy chain are colored pink (on the left-hand side); atoms in the light chains are colored faded-orange and faded-yellow (also on the left-hand side). Myosins ( / ˈ m aɪ ə s ɪ n , - oʊ -/ [ 1 ] [ 2 ] ) are a family of motor proteins best known for their roles in muscle contraction and in a ...