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The FMRIB Software Library, abbreviated FSL, is a software library containing image analysis and statistical tools for functional, structural and diffusion MRI brain imaging data. FSL is available as both precompiled binaries and source code for Apple and PC computers. It is freely available for non-commercial use.
FreeSurfer contains a set of programs with a common focus of analyzing magnetic resonance imaging (MRI) scans of brain tissue. It is an important tool in functional brain mapping and contains tools to conduct both volume based and surface based analysis. [ 4 ]
ITK is an open-source software toolkit for performing registration and segmentation. Segmentation is the process of identifying and classifying data found in a digitally sampled representation. Typically the sampled representation is an image acquired from such medical instrumentation as CT or MRI scanners. Registration is the task of aligning ...
For instance, it has been utilized in academic research involving automatic cranio-facial implant design, [29] brain tumor analysis from Magnetic Resonance images, [30] identification of features in focal liver lesions from MRI scans, [31] radiotherapy planning for prostate cancer, [32] preparation of datasets for fluorescence microscopy ...
Brain Tumor Segmentation under Studierfenster. Aortic Dissection Inpainting under Studierfenster. Studierfenster or StudierFenster (SF) [1] [2] [3] is a free, non-commercial open science client/server-based medical imaging processing online framework.
Neuroimaging software is used to study the structure and function of the brain. To see an NIH Blueprint for Neuroscience Research funded clearinghouse of many of these software applications, as well as hardware, etc. go to the NITRC web site.
CONN includes a user-friendly GUI to manage all aspects of functional connectivity analyses, [1] including preprocessing of functional and anatomical volumes, [2] elimination of subject-movement and physiological noise, [3] outlier scrubbing, [4] estimation of multiple connectivity and network measures, and population-level hypothesis testing.
Instance segmentation is an approach that identifies, for every pixel, the specific belonging instance of the object. It detects each distinct object of interest in the image. [19] For example, when each person in a figure is segmented as an individual object. Panoptic segmentation combines both semantic and instance segmentation. Like semantic ...