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Structural, Diffusion and Functional MRI datasets Human Human Macroscopic MRI datasets and Metadata Healthy and Pain Conditions Yes [41] Pig Brain Atlas Pig Brain Atlas is a three-dimensional MRI-based averaged brain and atlas of the neonatal piglet (Sus scrofa). Pig (Sus scrofa) Macroscopic Structural MRI Healthy Yes [42] Primate Cell Type ...
The Brain Imaging Data Structure (BIDS) is a standard for organizing, annotating, and describing data collected during neuroimaging experiments. It is based on a formalized file and directory structure and metadata files (based on JSON and TSV ) with controlled vocabulary . [ 1 ]
A T1 weighted MR image of the brain of a patient with a meningioma after injection of an MRI contrast agent (top left), and the same image with the result of an interactive segmentation overlaid in green (3D model of the segmentation on the top right, axial and coronal views at the bottom).
The FMRIB Software Library, abbreviated FSL, is a software library containing image analysis and statistical tools for functional, structural and diffusion MRI brain imaging data. FSL is available as both precompiled binaries and source code for Apple and PC computers. It is freely available for non-commercial use.
For instance, it has been utilized in academic research involving automatic cranio-facial implant design, [29] brain tumor analysis from Magnetic Resonance images, [30] identification of features in focal liver lesions from MRI scans, [31] radiotherapy planning for prostate cancer, [32] preparation of datasets for fluorescence microscopy ...
The male cadaver is from Joseph Paul Jernigan, a 39-year-old Texas murderer who was executed by lethal injection on August 5, 1993. At the prompting of a prison chaplain he had agreed to donate his body for scientific research or medical use, without knowing about the Visible Human Project.
Neuroimaging software is used to study the structure and function of the brain. To see an NIH Blueprint for Neuroscience Research funded clearinghouse of many of these software applications, as well as hardware, etc. go to the NITRC web site.
FreeSurfer contains a set of programs with a common focus of analyzing magnetic resonance imaging (MRI) scans of brain tissue. It is an important tool in functional brain mapping and contains tools to conduct both volume based and surface based analysis. [ 4 ]