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Most Ensembl Genomes data is stored in MySQL relational databases and can be accessed by the Ensembl REST interface, the Perl API, Biomart or online. [5] Ensembl Genomes is an open project, and most of the code, tools, and data are available to the public. [6] Ensembl and Ensembl Genomes software uses an Apache 2.0 license [7] license.
Ensembl makes these data freely accessible to the world research community. All the data and code produced by the Ensembl project is available to download, [7] and there is also a publicly accessible database server allowing remote access. In addition, the Ensembl website provides computer-generated visual displays of much of the data.
Ensembl: provides automatic annotation databases for human, mouse, other vertebrate and eukaryote genomes; Ensembl Genomes: provides genome-scale data for bacteria, protists, fungi, plants and invertebrate metazoa, through a unified set of interactive and programmatic interfaces (using the Ensembl software platform)
The following versions of GFF exist: General Feature Format Version 2, generally deprecated . Gene Transfer Format 2.2, a derivative used by Ensembl; Generic Feature Format Version 3
IBM sells the version of SPSS Modeler 18.2.1 in two separate bundles of features. These two bundles are called "editions" by IBM: SPSS Modeler Professional: used for structured data, such as databases, mainframe data systems, flat files or BI systems; SPSS Modeler Premium: Includes all the features of Modeler Professional, with the addition of:
The files have names that begin with the table name and have an extension to indicate the file type. MySQL uses a .frm file to store the definition of the table, but this file is not a part of the MyISAM engine; instead it is a part of the server. The data file has a .MYD (MYData) extension. The index file has a .MYI (MYIndex) extension.
PSPP is a free software application for analysis of sampled data, intended as a free alternative for IBM SPSS Statistics. It has a graphical user interface [2] and conventional command-line interface. It is written in C and uses GNU Scientific Library for its mathematical routines. The name has "no official acronymic expansion". [3]
gretl is an example of an open-source statistical package. ADaMSoft – a generalized statistical software with data mining algorithms and methods for data management; ADMB – a software suite for non-linear statistical modeling based on C++ which uses automatic differentiation; Chronux – for neurobiological time series data; DAP – free ...