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  2. Project Jupyter - Wikipedia

    en.wikipedia.org/wiki/Project_Jupyter

    A Jupyter Notebook document is a JSON file, following a versioned schema, usually ending with the ".ipynb" extension. The main parts of the Jupyter Notebooks are: Metadata, Notebook format and list of cells. Metadata is a data Dictionary of definitions to set up and display the notebook. Notebook Format is a version number of the software.

  3. Notebook interface - Wikipedia

    en.wikipedia.org/wiki/Notebook_interface

    A notebook interface or computational notebook is a virtual notebook environment used for literate programming, a method of writing computer programs. [1] Some notebooks are WYSIWYG environments including executable calculations embedded in formatted documents; others separate calculations and text into separate sections.

  4. Comma-separated values - Wikipedia

    en.wikipedia.org/wiki/Comma-separated_values

    CSV is a delimited text file that uses a comma to separate values (many implementations of CSV import/export tools allow other separators to be used; for example, the use of a "Sep=^" row as the first row in the *.csv file will cause Excel to open the file expecting caret "^" to be the separator instead of comma ","). Simple CSV implementations ...

  5. List of RNA-Seq bioinformatics tools - Wikipedia

    en.wikipedia.org/wiki/List_of_RNA-Seq...

    BioJupies is a web-based platform that provides complete RNA-seq analysis solution from free alignment service to a complete data analysis report delivered as an interactive Jupyter Notebook. BioQueue is a web-based queue engine designed preferentially to improve the efficiency and robustness of job execution in bioinformatics research by ...

  6. IDL (programming language) - Wikipedia

    en.wikipedia.org/wiki/IDL_(programming_language)

    The findgen function in the above example returns a one-dimensional array of floating point numbers, with values equal to a series of integers starting at 0.. Note that the operation in the second line applies in a vectorized manner to the whole 100-element array created in the first line, analogous to the way general-purpose array programming languages (such as APL, J or K) would do it.

  7. Julia (programming language) - Wikipedia

    en.wikipedia.org/wiki/Julia_(programming_language)

    Julia is a high-level, general-purpose [17] dynamic programming language, designed to be fast and productive, [18] for e.g. data science, artificial intelligence, machine learning, modeling and simulation, most commonly used for numerical analysis and computational science.

  8. R (programming language) - Wikipedia

    en.wikipedia.org/wiki/R_(programming_language)

    The name of the language, R, comes from being both an S language successor as well as the shared first letter of the authors, Ross and Robert. [11] In August 1993, Ihaka and Gentleman posted a binary of R on StatLib — a data archive website. [12] At the same time, they announced the posting on the s-news mailing list. [13]

  9. Compartmental models in epidemiology - Wikipedia

    en.wikipedia.org/wiki/Compartmental_models_in...

    For the full specification of the model, the arrows should be labeled with the transition rates between compartments. Between S and I, the transition rate is assumed to be (/) / = /, where is the total population, is the average number of contacts per person per time, multiplied by the probability of disease transmission in a contact between a susceptible and an infectious subject, and / is ...