Search results
Results from the WOW.Com Content Network
Java library functions for manipulating sequences, protein structures, file parsers, CORBA interoperability, Distributed Annotation System (DAS), access to AceDB, dynamic programming, and simple statistical routines Linux, macOS, Windows: LGPL v2.1 Open Bioinformatics Foundation: BioJS: JavaScript library of components to visualize biological data
wapRNA This is a free web-based application for the processing of high-throughput RNA-Seq data (wapRNA) from next generation sequencing (NGS) platforms, such as Genome Analyzer of Illumina Inc. (Solexa) and SOLiD of Applied Biosystems (SOLiD). wapRNA provides an integrated tool for RNA sequence, refers to the use of High-throughput sequencing ...
MacVector is a commercial sequence analysis application for Apple Macintosh computers running Mac OS X. It is intended to be used by molecular biologists to help analyze, design, research and document their experiments in the laboratory. MacVector 18.1 is a Universal Binary capable of running on Intel and Apple Silicon Macs.
Structure prediction can be constrained using experimental data, including SHAPE, enzymatic cleavage, and chemical modification accessibility. Graphical user interfaces are available for Windows, Mac OS X, Linux. Programs are also available for use with Unix-style text interfaces. Also, a C++ class library is available. Yes: source & binaries ...
This list of sequence alignment software is a compilation of software tools and web portals used in pairwise sequence alignment and multiple sequence alignment. See structural alignment software for structural alignment of proteins.
EzEditor is a java-based sequence alignment editor for rRNA and protein coding genes. It allows manipulation of both DNA and protein sequence alignments for phylogenetic analysis: Neighbor Joining: Jeon, Y.S. et al. fastDNAml Optimized maximum likelihood (nucleotides only) Maximum likelihood: G.J. Olsen FastTree 2 [18]
It supports DIA-based profiling of PTMs, such as phosphorylation and ubiquitination, new technologies such as Scanning SWATH [36] and dia-PASEF, [37] and can perform library-free analyses (acts as a database search engine). [38] FlashLFQ Open source: FlashLFQ is an ultrafast label-free quantification algorithm for mass-spectrometry proteomics. [39]
Opera – free, proprietary, Chromium-based; Safari (web browser) – built-in from Mac OS X 10.3, available as a separate download for Mac OS X 10.2; SeaMonkey – open source Internet application suite; Shiira – open source; Sleipnir – free, by Fenrir Inc; Tor (anonymity network) – free, open source; Torch (web browser) – free, by ...