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  2. Glide (docking) - Wikipedia

    en.wikipedia.org/wiki/Glide_(docking)

    www.schrodinger.com /products /glide Glide is a molecular modeling software for docking of small molecules into proteins and other biopolymers . [ 1 ] [ 2 ] It was developed by Schrödinger, Inc.

  3. Desmond (software) - Wikipedia

    en.wikipedia.org/wiki/Desmond_(software)

    www.deshawresearch.com /resources _desmond.html, schrodinger.com /desmond Desmond is a software package developed at D. E. Shaw Research to perform high-speed molecular dynamics simulations of biological systems on conventional computer clusters .

  4. Jaguar (software) - Wikipedia

    en.wikipedia.org/wiki/Jaguar_(software)

    Jaguar is a computer software package used for ab initio quantum chemistry calculations for both gas and solution phases. [1] It is commercial software marketed by the company Schrödinger . The program was originated in research groups of Richard Friesner and William Goddard and was initially called PS-GVB (referring to the so-called ...

  5. Comparison of software for molecular mechanics modeling

    en.wikipedia.org/wiki/Comparison_of_software_for...

    Free open source: ms-2.de: OpenMM: No No Yes Yes Yes Yes No Yes Yes High Performance MD, highly flexible, Python scriptable Free open source MIT: OpenMM: Orac: No No Yes Yes No Yes No Yes No Molecular dynamics simulation program to explore free energy surfaces in biomolecular systems at the atomic level Free open source: Orac download page ...

  6. Schrödinger, Inc. - Wikipedia

    en.wikipedia.org/wiki/Schrödinger,_Inc.

    Schrödinger, Inc. is an international scientific software and biotechnology company that specializes in developing computational tools and software for drug discovery and materials science. Schrödinger's software is used by pharmaceutical companies , biotech firms, and academic researchers to simulate and model the behavior of molecules at ...

  7. List of protein-ligand docking software - Wikipedia

    en.wikipedia.org/wiki/List_of_protein-ligand...

    The number of notable protein-ligand docking programs currently available is high and has been steadily increasing over the last decades. The following list presents an overview of the most common notable programs, listed alphabetically, with indication of the corresponding year of publication, involved organisation or institution, short description, availability of a webservice and the license.

  8. Maestro (software) - Wikipedia

    en.wikipedia.org/wiki/Maestro_(software)

    Maestro (software) was a free program released by NASA to allow users to view photos and daily progress of the Spirit and Opportunity rovers. It served as an activity planner for Mars that utilized a combination of 2D and 3D visuals to track the movement and missions of the Spirit and Opportunity rovers in 2004. [1]

  9. List of quantum chemistry and solid-state physics software

    en.wikipedia.org/wiki/List_of_quantum_chemistry...

    Quantum chemistry computer programs are used in computational chemistry to implement the methods of quantum chemistry.Most include the Hartree–Fock (HF) and some post-Hartree–Fock methods.