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Tajima's D is a population genetic test statistic created by and named after the Japanese researcher Fumio Tajima. [1] Tajima's D is computed as the difference between two measures of genetic diversity: the mean number of pairwise differences and the number of segregating sites, each scaled so that they are expected to be the same in a neutrally evolving population of constant size.
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Fumio Tajima was born in Ōkawa, in Japan's Fukuoka prefecture, in 1951. [1] [2] He graduated from high school in 1970, completed his undergraduate degree at Kyushu University in 1976, and received a Master's degree from the same institution in 1978. [3]
Other export options include the current timetree calibrations, analysis summary, partition list, and pairwise distances. [40] The tree explorer also provide options to save the current tree display in an image format or to the clipboard under the image menu option. The image format supported are BMP, PNG, PDF, SVG, TIFF, and EMF. [41]
The allele frequency spectrum can be written as the vector = (,,,,), where is the number of observed sites with derived allele frequency .In this example, the observed allele frequency spectrum is (,,,,), due to four instances of a single observed derived allele at a particular SNP loci, two instances of two derived alleles, and so on.
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