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2. List of Unified Modeling Language tools - Wikipedia

   en.wikipedia.org/wiki/List_of_Unified_Modeling...

   Includes glossary, data dictionary, and issue tracking. Supports use case diagrams, auto-generated flow diagrams, screen mock-ups, and free-form diagrams. clang-uml: Un­known Un­known Un­known Un­known No C++ PlantUML, Mermaid.js Generate PlantUML and Mermaild.js diagrams from existing C++ codebase. Dia: Partly No No No

3. List of bioinformatics software - Wikipedia

   en.wikipedia.org/.../List_of_bioinformatics_software

   The list of bioinformatics software tools can be split up according to the license used: List of proprietary bioinformatics software; List of open-source bioinformatics software; Alternatively, here is a categorization according to the respective bioinformatics subfield specialized on: Sequence analysis software. List of sequence alignment software

4. List of sequence alignment software - Wikipedia

   en.wikipedia.org/wiki/List_of_sequence_alignment...

   Software suite to search and cluster huge sequence sets. Similar sensitivity to BLAST and PSI-BLAST but orders of magnitude faster: Protein: Steinegger M, Mirdita M, Galiez C, Söding J [10] 2017 USEARCH Ultra-fast sequence analysis tool: Both: Edgar, R. C. (2010). "Search and clustering orders of magnitude faster than BLAST". Bioinformatics.

5. List of open-source bioinformatics software - Wikipedia

   en.wikipedia.org/wiki/List_of_open-source...

   Algorithm and program for comparing primary biological sequence information, including DNA and protein sequences. Cross-platform: Public domain: National Center for Biotechnology Information: CP2K: Perform atomistic simulations of solid state, liquid, molecular and biological systems, written in Fortran 2003. ? GPL and LGPL: Free open source ...

6. List of alignment visualization software - Wikipedia

   en.wikipedia.org/wiki/List_of_alignment...

   The fourth is a great example of how interactive graphical tools enable a worker involved in sequence analysis to conveniently execute a variety if different computational tools to explore an alignment's phylogenetic implications; or, to predict the structure and functional properties of a specific sequence, e.g., comparative modelling.

7. List of SysML tools - Wikipedia

   en.wikipedia.org/wiki/List_of_SysML_tools

   Open source Software license Programming language used Astah: ChangeVision, Inc. [1] Windows, macOS 2009-10-19 2024-12-04 (v10) [2] No Commercial Java Cameo Systems Modeler 3DS Catia, No Magic Windows, Linux, macOS Commercial Java Capella: Thales Group & Eclipse Foundation community Windows, Linux, macOS 2015-04-06 [3] 2020-11-17 (v5.0) [4] Yes ...

8. Dia (software) - Wikipedia

   en.wikipedia.org/wiki/Dia_(software)

   Dia has special objects to help draw entity-relationship models, Unified Modeling Language (UML) diagrams, flowcharts, network diagrams, and simple electrical circuits. It is also possible to add support for new shapes by writing simple XML files, using a subset of Scalable Vector Graphics (SVG) to draw the shape.

9. List of mass spectrometry software - Wikipedia

   en.wikipedia.org/wiki/List_of_mass_spectrometry...

   Open source: Easotope software archives, organizes, and analyzes mass spectrometer data. It is currently oriented toward clumped CO 2 analysis but is also useful for bulk CO 2 work and expandable to other isotopic systems. El-MAVEN Open-source Desktop software by Elucidata processes labeled LC-MS, GC-MS and LC-MS/MS data in open-formats (mzXML ...