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The Burrows–Wheeler transform (BWT, also called block-sorting compression) rearranges a character string into runs of similar characters. This is useful for compression, since it tends to be easy to compress a string that has runs of repeated characters by techniques such as move-to-front transform and run-length encoding.
In mathematics, the lexicographic or lexicographical order (also known as lexical order, or dictionary order) is a generalization of the alphabetical order of the dictionaries to sequences of ordered symbols or, more generally, of elements of a totally ordered set. There are several variants and generalizations of the lexicographical ordering.
The failure function for the string is computed as normal, but the string is rotated during the computation so some indices must be computed more than once as they wrap around. Once all indices of the failure function have been successfully computed without the string rotating again, the minimal lexicographical rotation is known to be found and ...
Suffix arrays are closely related to suffix trees: . Suffix arrays can be constructed by performing a depth-first traversal of a suffix tree. The suffix array corresponds to the leaf-labels given in the order in which these are visited during the traversal, if edges are visited in the lexicographical order of their first character.
In mathematics, and particularly in the theory of formal languages, shortlex is a total ordering for finite sequences of objects that can themselves be totally ordered. In the shortlex ordering, sequences are primarily sorted by cardinality (length) with the shortest sequences first, and sequences of the same length are sorted into lexicographical order. [1]
Radix sort is an algorithm that sorts numbers by processing individual digits. n numbers consisting of k digits each are sorted in O(n · k) time. Radix sort can process digits of each number either starting from the least significant digit (LSD) or starting from the most significant digit (MSD). The LSD algorithm first sorts the list by the ...
It stores the lengths of the longest common prefixes (LCPs) between all pairs of consecutive suffixes in a sorted suffix array. For example, if A := [ aab , ab , abaab , b , baab ] is a suffix array, the longest common prefix between A [1] = aab and A [2] = ab is a which has length 1, so H [2] = 1 in the LCP array H .
The same property is true for a larger class of graphs, the distance-hereditary graphs: distance-hereditary graphs are perfectly orderable, with a perfect ordering given by the reverse of a lexicographic ordering, so lexicographic breadth-first search can be used in conjunction with greedy coloring algorithms to color them optimally in linear time.