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The allele frequency spectrum can be written as the vector = (,,,,), where is the number of observed sites with derived allele frequency .In this example, the observed allele frequency spectrum is (,,,,), due to four instances of a single observed derived allele at a particular SNP loci, two instances of two derived alleles, and so on.
The Hardy–Weinberg law describes the relationship between allele and genotype frequencies when a population is not evolving. Let's examine the Hardy–Weinberg equation using the population of four-o'clock plants that we considered above:
Hubbell's theta. The UNTB model produces a dimensionless "fundamental biodiversity" number, θ, which is derived using the formula: θ = 2J m v. where: J m is the size of the metacommunity (the outside source of immigrants to the local community) v is the speciation rate in the model
In Bayesian statistics, the model is extended by adding a probability distribution over the parameter space . A statistical model can sometimes distinguish two sets of probability distributions. The first set Q = { F θ : θ ∈ Θ } {\displaystyle {\mathcal {Q}}=\{F_{\theta }:\theta \in \Theta \}} is the set of models considered for inference.
In population genetics, the Watterson estimator is a method for describing the genetic diversity in a population. It was developed by Margaret Wu and G. A. Watterson in the 1970s.
The proper way of applying the abstract mathematics of the theorem to actual biology has been a matter of some debate, however, it is a true theorem. [3] It states: "The rate of increase in fitness of any organism at any time is equal to its genetic variance in fitness at that time." [4] Or in more modern terminology:
The effective population size (N e) is the size of an idealised population that would experience the same rate of genetic drift as the real population. [1] Idealised populations are those following simple one-locus models that comply with assumptions of the neutral theory of molecular evolution.
Fst values between European populations. The fixation index (F ST) is a measure of population differentiation due to genetic structure.It is frequently estimated from genetic polymorphism data, such as single-nucleotide polymorphisms (SNP) or microsatellites.