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This list of protein subcellular localisation prediction tools includes software, databases, and web services that are used for protein subcellular localization prediction. Some tools are included that are commonly used to infer location through predicted structural properties, such as signal peptide or transmembrane helices , and these tools ...
A unified interface for: Tertiary structure prediction/3D modelling, 3D model quality assessment, Intrinsic disorder prediction, Domain prediction, Prediction of protein-ligand binding residues Automated webserver and some downloadable programs RaptorX: remote homology detection, protein 3D modeling, binding site prediction
University of Washington and The Baker Labs; structure prediction, protein folding Proprietary, commercial or gratis fold.it download page Archived 2011-04-04 at the Wayback Machine: FoldX: I Yes Yes No No No No No No Energy calculations, protein design Proprietary, commercial or gratis CRG: GROMACS: No No Yes Yes No [2] Yes I Yes [3] Yes High ...
Name Method description Type Link Initial release RaptorX-SS8 : predict both 3-state and 8-state secondary structure using conditional neural fields from PSI-BLAST profiles ...
Name Description Knots [Note 1]Links References trRosettaRNA: trRosettaRNA is an algorithm for automated prediction of RNA 3D structure. It builds the RNA structure by Rosetta energy minimization, with deep learning restraints from a transformer network (RNAformer). trRosettaRNA has been validated in blind tests, including CASP15 and RNA-Puzzles, which suggests that the automated predictions ...
Pyramid is an open source web framework written in Python and is based on WSGI.It is a minimalistic web framework inspired by Zope, Pylons and Django. [4]Originally called "repoze.bfg", Pyramid gathered attention mostly in the Zope [5] and Plone community as the Open Society Institute's KARL project migrated from Plone to BFG. [6]
Pyramid’s decision intelligence platform consists of data preparation, data science and business analytics modules with AI capabilities. Pyramid’s PYRANA query engine launched in 2018 as a new query engine that runs directly on data lakes, OLAP and relational, and other types of data sources to boost query performance for different ...
Appery.io is a cloud-based HTML5, Ionic, jQuery Mobile, and hybrid app-building platform for developing mobile apps, web apps, and PWAs. Appery.io is a browser-based drag-and-drop visual builder tool that supports Android and iOS with integrated Apache Cordova/PhoneGap output. [1] [2] [3] The platform is used by DIYers to create apps for their ...