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  2. Rosalind (education platform) - Wikipedia

    en.wikipedia.org/wiki/Rosalind_(education_platform)

    Rosalind is an educational resource and web project for learning bioinformatics through problem solving and computer programming. [1] [2] [3] Rosalind users learn bioinformatics concepts through a problem tree that builds up biological, algorithmic, and programming knowledge concurrently or learn by topics, with the topic of Alignment, Combinatorics, Computational Mass Spectrometry, Heredity ...

  3. List of open-source bioinformatics software - Wikipedia

    en.wikipedia.org/wiki/List_of_open-source...

    Open Bioinformatics Foundation: Biopython: Python language toolkit Cross-platform: Biopython [2] Open Bioinformatics Foundation: BioRuby: Ruby language toolkit Linux, macOS, Windows [3] GPL v2 or Ruby: Open Bioinformatics Foundation: BLAST: Algorithm and program for comparing primary biological sequence information, including DNA and protein ...

  4. BioJava - Wikipedia

    en.wikipedia.org/wiki/BioJava

    BioJava is an open-source software project dedicated to provide Java tools to process biological data. [1] [2] [3] BioJava is a set of library functions written in the programming language Java for manipulating sequences, protein structures, file parsers, Common Object Request Broker Architecture (CORBA) interoperability, Distributed Annotation System (DAS), access to AceDB, dynamic ...

  5. Bioinformatics - Wikipedia

    en.wikipedia.org/wiki/Bioinformatics

    Download as PDF; Printable version; ... Basic bioinformatics services are ... also offers open source educational materials for free. The course runs on low cost ...

  6. BioPerl - Wikipedia

    en.wikipedia.org/wiki/BioPerl

    BioPerl is an active open source software project supported by the Open Bioinformatics Foundation.The first set of Perl codes of BioPerl was created by Tim Hubbard and Jong Bhak [citation needed] at MRC Centre Cambridge, where the first genome sequencing was carried out by Fred Sanger.

  7. Molecular Evolutionary Genetics Analysis - Wikipedia

    en.wikipedia.org/wiki/Molecular_Evolutionary...

    MEGA is in two version. A graphical user interface is available as a native Microsoft Windows program. A command line version, MEGA-Computing Core (MEGA-CC), is available for native cross-platform operation. The method is widely used and cited. With millions of downloads across the releases, MEGA is cited in more than 85,000 papers.

  8. List of gene prediction software - Wikipedia

    en.wikipedia.org/wiki/List_of_gene_prediction...

    [10] [11] FGENESH: HMM-based gene structure prediction: multiple genes, both chains: Eukaryotes [12] FrameD: Find genes and frameshift in G+C rich prokaryote sequences: Prokaryotes, Eukaryotes [13] GeMoMa: Homology-based gene prediction based on amino acid and intron position conservation as well as RNA-Seq data [14] [15] GENIUS II

  9. Biopython - Wikipedia

    en.wikipedia.org/wiki/Biopython

    Biopython development began in 1999 and it was first released in July 2000. [7] It was developed during a similar time frame and with analogous goals to other projects that added bioinformatics capabilities to their respective programming languages, including BioPerl, BioRuby and BioJava.