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Open Journal Systems, also known as OJS, is an open source and free software for the management of peer-reviewed academic journals, created by the Public Knowledge Project, and released under the GNU General Public License.
A workflow management system used for building and running scalable and reproducible bioinformatics pipelines, especially in cloud and high-performance computing environments. Linux, macOS, Windows: Apache License 2.0 Nextflow Team [6] PathVisio: Desktop software for drawing, analyzing, and visualizing biological pathways Linux, macOS, Windows ...
Computational and Structural Biotechnology Journal; Computational Biology and Chemistry; Computers in Biology and Medicine; Current Bioinformatics; Database; EMBnet.journal; Evolutionary Bioinformatics; GigaScience; IEEE/ACM Transactions on Computational Biology and Bioinformatics; Journal of the American Medical Informatics Association
UGENE is computer software for bioinformatics. [1] [2] It works on personal computer operating systems such as Windows, macOS, or Linux.It is released as free and open-source software, under a GNU General Public License (GPL) version 2.
The list of bioinformatics software tools can be split up according to the license used: List of proprietary bioinformatics software; List of open-source bioinformatics software; Alternatively, here is a categorization according to the respective bioinformatics subfield specialized on: Sequence analysis software. List of sequence alignment software
Institute of Bioinformatics (IOB), Bangalore, India: One source claims 15000 [17] proteins. But it is unclear how many of these are unique Pfam: Sanger Institute: protein families database of alignments and HMMs Protein sequence databases Human Proteinpedia: Institute of Bioinformatics (IOB), Bangalore and Johns Hopkins University,
BioLinux is a term used in a variety of projects involved in making access to bioinformatics software on a Linux platform easier using one or more of the following methods: Provision of complete systems; Provision of bioinformatics software repositories; Addition of bioinformatics packages to standard distributions
Software suite to search and cluster huge sequence sets. Similar sensitivity to BLAST and PSI-BLAST but orders of magnitude faster: Protein: Steinegger M, Mirdita M, Galiez C, Söding J [10] 2017 USEARCH Ultra-fast sequence analysis tool: Both: Edgar, R. C. (2010). "Search and clustering orders of magnitude faster than BLAST". Bioinformatics.