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3D Slicer (Slicer) is a free and open source software package for image analysis [1] [2] and scientific visualization. Slicer is used in a variety of medical applications, including autism , multiple sclerosis , systemic lupus erythematosus , prostate cancer , lung cancer , breast cancer , schizophrenia , orthopedic biomechanics , COPD ...
This implies that two MIP renderings from opposite viewpoints are symmetrical images if they are rendered using orthographic projection. MIP is used for the detection of lung nodules in lung cancer screening programs which use computed tomography scans. MIP enhances the 3D nature of these nodules, making them stand out from pulmonary bronchi ...
Java 3D applet or standalone program: Ovito: MM XRD EM MD: Free open-source: Python [13] [14] PyMOL: MM XRD SMI EM: Open-source [15] Python [16] [self-published source?] According to the author, almost 1/4 of all published images of 3D protein structures in the scientific literature were made via PyMOL. [citation needed] RasMol: Free open ...
Image Viewing and Movie Making: Viewing of large 3D images slice by slice within 3dmod interface. The ability to view 3D images and models at arbitrary orientations using 3dmod's slicer window. The ability to make high movies of 2D image slices and/or 3D mesh models. Image Processing: IMOD suite includes several automatic segmentation programs.
Imaris is Bitplane's core product which provides functionality for the visualization, segmentation and interpretation of 3D and 4D microscopy datasets. Imaris allows visualization of original and derived data objects in a real time interactive manner so one can quickly make visual assessments of one's experiments in 3D and 4D to discover relationships that are otherwise hidden.
However, due to the often much larger image file size and a much bigger number of specimens in the experiments, in many cases it is needed to develop new 3D image registration software.BrainAligner [12] is software that has been used to automate the 3D deformable and nonlinear registration process using a reliable-landmark-matching strategy. It ...
Amira (ah-MEER-ah) is a software platform for visualization, processing, and analysis of 3D and 4D data. It is being actively developed by Thermo Fisher Scientific in collaboration with the Zuse Institute Berlin (ZIB), and commercially distributed by Thermo Fisher Scientific — together with its sister software Avizo.
Version 3.0, supporting volumetric analysis of 3D image stacks and optional deep learning modules, was released in October 2017. [16] CellProfiler 4.0 was released in September 2020 and focused on speed, usability, and utility improvements with most notable example of migration to Python 3.