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Four novel alternative genetic codes were discovered in bacterial genomes by Shulgina and Eddy using their codon assignment software Codetta, and validated by analysis of tRNA anticodons and identity elements; [3] these codes are not currently adopted at NCBI, but are numbered here 34-37, and specified in the table below.
Functional genomics attempts to answer questions about the function of DNA at the levels of genes, RNA transcripts, and protein products. A key characteristic of functional genomics studies is their genome-wide approach to these questions, generally involving high-throughput methods rather than a more traditional "gene-by-gene" approach.
The code emerges at a transition when the mapping of codons to amino acids becomes nonrandom. The code's emergence is governed by the topology defined by the probable errors and is related to the map coloring problem. [109] Game theory: Models based on signaling games combine elements of game theory, natural selection and information channels ...
Molecular genetics is a branch of biology that addresses how differences in the structures or expression of DNA molecules manifests as variation among organisms. Molecular genetics often applies an "investigative approach" to determine the structure and/or function of genes in an organism's genome using genetic screens.
The study of the genome is called genomics. The genomes of many organisms have been sequenced and various regions have been annotated. The first genome to be sequenced was that of the virus φX174 in 1977; [ 4 ] the first genome sequence of a prokaryote ( Haemophilus influenzae ) was published in 1995; [ 5 ] the yeast ( Saccharomyces cerevisiae ...
Landscape genomics analyzes adaptive markers, whereas landscape genetics only analyzes neutral markers. [3] The field of genomics began to grow in the 1970s when new technology was discovered by A.M. Maxam and W. Gilbert, [4] and continued to advance with the widely recognized Human Genome Project. It was the application of the technology and ...
Genomics – applies recombinant DNA, DNA sequencing methods, and bioinformatics to sequence, assemble, and analyze the function and structure of genomes (the complete set of DNA within a single cell of an organism). [35] [36] The field includes efforts to determine the entire DNA sequence of organisms and fine-scale genetic mapping.
DNA barcoding is a method of species identification using a short section of DNA from a specific gene or genes. The premise of DNA barcoding is that by comparison with a reference library of such DNA sections (also called "sequences"), an individual sequence can be used to uniquely identify an organism to species, just as a supermarket scanner uses the familiar black stripes of the UPC barcode ...