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  2. Nucleotide diversity - Wikipedia

    en.wikipedia.org/wiki/Nucleotide_diversity

    It is usually associated with other statistical measures of population diversity, and is similar to expected heterozygosity. This statistic may be used to monitor diversity within or between ecological populations, to examine the genetic variation in crops and related species, [3] or to determine evolutionary relationships. [4]

  3. Infinite sites model - Wikipedia

    en.wikipedia.org/wiki/Infinite_sites_model

    Using allele frequencies, it allows for the calculation of heterozygosity, or genetic diversity, in a finite population and for the estimation of genetic distances between populations of interest. The assumptions of the ISM are that (1) there are an infinite number of sites where mutations can occur, (2) every new mutation occurs at a novel ...

  4. F-statistics - Wikipedia

    en.wikipedia.org/wiki/F-statistics

    The measures F IS, F ST, and F IT are related to the amounts of heterozygosity at various levels of population structure. Together, they are called F-statistics, and are derived from F, the inbreeding coefficient. In a simple two-allele system with inbreeding, the genotypic frequencies are:

  5. Zygosity - Wikipedia

    en.wikipedia.org/wiki/Zygosity

    Heterozygosity values of 51 worldwide human populations. [10] Sub-Saharan Africans have the highest values in the world. In population genetics, the concept of heterozygosity is commonly extended to refer to the population as a whole, i.e., the fraction of individuals in a population that are heterozygous for a particular locus. It can also ...

  6. Loss of heterozygosity - Wikipedia

    en.wikipedia.org/wiki/Loss_of_heterozygosity

    The remaining copy of the tumor suppressor gene can be inactivated by a point mutation or via other mechanisms, resulting in a loss of heterozygosity event, and leaving no tumor suppressor gene to protect the body. Loss of heterozygosity does not imply a homozygous state (which would require the presence of two identical alleles in the cell).

  7. Genetic diversity - Wikipedia

    en.wikipedia.org/wiki/Genetic_diversity

    Heterozygosity is the fraction of individuals in a population that are heterozygous for a particular locus. Alleles per locus is also used to demonstrate variability. Nucleotide diversity is the extent of nucleotide polymorphisms within a population, and is commonly measured through molecular markers such as micro- and minisatellite sequences ...

  8. Heterozygote advantage - Wikipedia

    en.wikipedia.org/wiki/Heterozygote_advantage

    A significantly lower proportion of HLA-DRB1 heterozygosity exists among HCV-infected cases than uninfected cases. The differences were more pronounced with alleles represented as functional supertypes (P = 1.05 × 10 −6 ) than those represented as low-resolution genotypes (P = 1.99 × 10 −3 ).

  9. Coalescent theory - Wikipedia

    en.wikipedia.org/wiki/Coalescent_theory

    Mean heterozygosity is calculated as the probability of a mutation occurring at a given generation divided by the probability of any "event" at that generation (either a mutation or a coalescence). The probability that the event is a mutation is the probability of a mutation in either of the two lineages: 2 μ {\displaystyle 2\mu } .