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BisQue [1] is a free, open source web-based platform for the exchange and exploration of large, complex datasets. It is being developed at the Vision Research Lab [2] at the University of California, Santa Barbara. BisQue specifically supports large scale, multi-dimensional multimodal-images and image analysis.
MITK, the Medical Imaging Interaction Toolkit is an open source project for developing interactive medical image processing software, developed at the Deutsche Krebsforschungszentrum, Heidelberg Voreen , an open source, multi-platform volume rendering engine, maintained by the Visualization and Computer Graphics Research Group (VisCG) at the ...
3D Slicer (Slicer) is a free and open source software package for image analysis [1] [2] and scientific visualization. Slicer is used in a variety of medical applications, including autism , multiple sclerosis , systemic lupus erythematosus , prostate cancer , lung cancer , breast cancer , schizophrenia , orthopedic biomechanics , COPD ...
Manual image annotation is the process of manually defining regions in an image and creating a textual description of those regions. Such annotations can for instance be used to train machine learning algorithms for computer vision applications. This is a list of computer software which can be used for manual annotation of images.
Open Bioinformatics Foundation: BioPerl: Perl language toolkit Cross-platform: Artistic, GPL: Open Bioinformatics Foundation: BioPHP: PHP language toolkit with classes for DNA and protein sequence analysis, alignment, database parsing, and other bioinformatics tools Cross-platform: GPL v2 Open Bioinformatics Foundation: Biopython: Python ...
Scilab is a free and open-source, cross-platform numerical computational package and a high-level, numerically oriented programming language.It can be used for signal processing, statistical analysis, image enhancement, fluid dynamics simulations, numerical optimization, and modeling, simulation of explicit and implicit dynamical systems and (if the corresponding toolbox is installed) symbolic ...
digiKam has been in development since before 2006. As of version 0.9 features include a GPS locator [9] and synchronization, [10] iPod Photo upload support, [11] an advanced metadata editor, [12] better support for raw image formats (using dcraw included in digiKam), full color management, a light-table, [13] pan-tool in Image Editor and Preview mode, improvements in usability, and many new ...
Many free and open-source software tools have existed and continued to grow since the 1980s. [59] The combination of a continued need for new algorithms for the analysis of emerging types of biological readouts, the potential for innovative in silico experiments, and freely available open code bases have created opportunities for research ...