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  2. Protein pKa calculations - Wikipedia

    en.wikipedia.org/wiki/Protein_pKa_calculations

    The pK a values of an amino acid side chain in solution is typically inferred from the pK a values of model compounds (compounds that are similar to the side chains of amino acids). See Amino acid for the pK a values of all amino acid side chains inferred in such a way. There are also numerous experimental studies that have yielded such values ...

  3. Histidine - Wikipedia

    en.wikipedia.org/wiki/Histidine

    Histidine ball and stick model spinning. Histidine (symbol His or H) [2] is an essential amino acid that is used in the biosynthesis of proteins.It contains an α-amino group (which is in the protonated –NH 3 + form under biological conditions), a carboxylic acid group (which is in the deprotonated –COO − form under biological conditions), and an imidazole side chain (which is partially ...

  4. Van Slyke determination - Wikipedia

    en.wikipedia.org/wiki/Van_Slyke_determination

    The Van Slyke determination is a chemical test for the determination of amino acids containing a primary amine group. It is named after the biochemist Donald Dexter Van Slyke (1883-1971). [1] One of Van Slyke's first professional achievements was the quantification of amino acids by the Van Slyke determination reaction. [2]

  5. Protein kinase A - Wikipedia

    en.wikipedia.org/wiki/Protein_kinase_A

    In cell biology, protein kinase A (PKA) is a family of serine-threonine kinase [1] whose activity is dependent on cellular levels of cyclic AMP (cAMP). PKA is also known as cAMP-dependent protein kinase (EC 2.7.11.11). PKA has several functions in the cell, including regulation of glycogen, sugar, and lipid metabolism.

  6. Hydrophobicity scales - Wikipedia

    en.wikipedia.org/wiki/Hydrophobicity_scales

    Also, amino acid side chain affinity for water was measured using vapor phases. [14] Vapor phases represent the simplest non polar phases, because it has no interaction with the solute. [ 18 ] The hydration potential and its correlation to the appearance of amino acids on the surface of proteins was studied by Wolfenden.

  7. Ka/Ks ratio - Wikipedia

    en.wikipedia.org/wiki/Ka/Ks_ratio

    It will only calculate selective pressure within protein coding regions. In addition, selection that does not cause differences at an amino acid level—for instance, balancing selection—cannot be detected by these techniques. [1] Another issue is that heterogeneity within a gene can make a result hard to interpret.

  8. Template : Blood gas, acid-base, & gas exchange terms

    en.wikipedia.org/wiki/Template:Blood_gas,_acid...

    Blood gas, acid-base, and gas exchange terms; P a O 2: Arterial oxygen tension, or partial pressure: P A O 2: Alveolar oxygen tension, or partial pressure: P a CO 2: Arterial carbon dioxide tension, or partial pressure: P A CO 2: Alveolar carbon dioxide tension, or partial pressure: P v O 2: Oxygen tension of mixed venous blood: P (A-a) O 2 ...

  9. Alanine racemase - Wikipedia

    en.wikipedia.org/wiki/Alanine_racemase

    The arginine group has a pKa of about 12.6 and is therefore unlikely to protonate the pyridine. Normally in PLP reactions an acidic amino acid residue such as a carboxylic acid group, with a pKa of about 5, protonates the pyridine ring. [8] The protonation of the pyridine nitrogen allows the nitrogen to accept additional negative charge.