Search results
Results from the WOW.Com Content Network
Families of Structurally Similar Proteins or FSSP is a database of structurally superimposed proteins generated using the "Distance-matrix ALIgnment" (DALI) algorithm.The database currently contains an extended structural family for each of 330 representative protein chains. Each data set contains structural alignments of one search structure ...
The new Structural Classification of Proteins version 2 (SCOP2) database was released at the beginning of 2020. The new update featured an improved database schema, a new API and modernised web interface. This was the most significant update by the Cambridge group since SCOP 1.75 and builds on the advances in schema from the SCOP 2 prototype. [7]
An example is the Rossman fold comprising several alternating α helices and parallel β strands. In the SCOP, CATH, and FSSP databases, the known protein structures have been classified into hierarchical levels of structural complexity with the fold as a basic level of classification. Homologous domain (sequence context)
Interactive maps, databases and real-time graphics from The Huffington Post. HuffPost Data. Visualization, analysis, interactive maps and real-time graphics. Browse ...
It has been used to construct the FSSP structural alignment database (Fold classification based on Structure-Structure alignment of Proteins, or Families of Structurally Similar Proteins). A DALI webserver can be accessed at DALI and the FSSP is located at The Dali Database.
FSSP may refer to: Families of structurally similar proteins, a protein structures database; Federal Bailiffs Service (Russia), abbreviated FSSP in Russian; Firing squad synchronization problem, a problem in computer science and cellular automata; Frances Slocum State Park, a state park in Luzerne County, Pennsylvania
FSSP database References. This page was last edited on 22 December 2024, at 04:12 (UTC). Text is available under the Creative Commons Attribution-ShareAlike 4.0 ...
The DALI method has also been used to construct a database known as FSSP (Fold classification based on Structure-Structure alignment of Proteins, or Families of Structurally Similar Proteins) in which all known protein structures are aligned with each other to determine their structural neighbors and fold classification.