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  2. DESeq2 - Wikipedia

    en.wikipedia.org/wiki/DESeq2

    By incorporating the negative binomial distribution, DESeq2 accurately models the dispersion of gene expression counts and provides more reliable estimates of differential expression. DESeq2 also offers an adaptive shrinkage procedure, known as the "apeglm" method, which is particularly useful when dealing with small sample sizes. [ 6 ]

  3. List of RNA-Seq bioinformatics tools - Wikipedia

    en.wikipedia.org/wiki/List_of_RNA-Seq...

    Using DESeq2 as a framework, DEvis provides a wide variety of tools for data manipulation, visualization, and project management. DEXSeq is Bioconductor package that finds differential differential exon usage based on RNA-Seq exon counts between samples. DEXSeq employs negative binomial distribution, provides options to visualization and ...

  4. RNA-Seq - Wikipedia

    en.wikipedia.org/wiki/RNA-Seq

    Methods: Most tools use regression or non-parametric statistics to identify differentially expressed genes, and are either based on read counts mapped to a reference genome (DESeq2, limma, edgeR) or based on read counts derived from alignment-free quantification (sleuth, [106] Cuffdiff, [107] Ballgown [108]). [109]

  5. Extract, transform, load - Wikipedia

    en.wikipedia.org/wiki/Extract,_transform,_load

    Extract, transform, load (ETL) is a three-phase computing process where data is extracted from an input source, transformed (including cleaning), and loaded into an output data container. The data can be collected from one or more sources and it can also be output to one or more destinations.

  6. Trump team plans to deport some migrants to countries other ...

    www.aol.com/incoming-trump-administration-plans...

    The incoming Trump administration is preparing a list of countries to which it may deport migrants when their home countries refuse to accept them, according to three sources familiar with the plans.

  7. Normalized frequency (signal processing) - Wikipedia

    en.wikipedia.org/wiki/Normalized_frequency...

    In digital signal processing (DSP), a normalized frequency is a ratio of a variable frequency and a constant frequency associated with a system (such as a sampling rate, ). Some software applications require normalized inputs and produce normalized outputs, which can be re-scaled to physical units when necessary.

  8. Elton John Reveals Which of His Own Songs Are His ... - AOL

    www.aol.com/lifestyle/elton-john-reveals-own...

    Elton John's gift may be his song, but that doesn't mean he loves them all.. During an appearance on The Late Show with Stephen Colbert on Tuesday, Dec. 17, the 77-year-old musician spoke about ...

  9. How investigators, prosecutors bungled probe of boat crash ...

    www.aol.com/investigators-prosecutors-bungled...

    A Miami Herald investigation into the boat crash that killed a 17-year-old Lourdes student reveals a deeply flawed probe as FWC investigators and prosecutors built a case against George Pino.