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Lattice models in biophysics represent a class of statistical-mechanical models which consider a biological macromacromolecule (such as DNA, protein, actin, etc.) as a lattice of units, each unit being in different states or conformations.
A lattice is an abstract structure studied in the mathematical subdisciplines of order theory and abstract algebra.It consists of a partially ordered set in which every pair of elements has a unique supremum (also called a least upper bound or join) and a unique infimum (also called a greatest lower bound or meet).
An algebraic lattice is complete. (def) 10. A complete lattice is bounded. 11. A heyting algebra is bounded. (def) 12. A bounded lattice is a lattice. (def) 13. A heyting algebra is residuated. 14. A residuated lattice is a lattice. (def) 15. A distributive lattice is modular. [3] 16. A modular complemented lattice is relatively complemented ...
An ordered vector space is called order complete, Dedekind complete, a complete vector lattice, or a complete Riesz space, if it is order complete as a subset of itself, [1] [2] in which case it is necessarily a vector lattice. An ordered vector space is said to be countably order complete if each countable subset that is bounded above has a ...
In the second part of the book, chapter 5 concerns the theorem that every finite Boolean lattice is isomorphic to the lattice of subsets of a finite set, and (less trivially) Birkhoff's representation theorem according to which every finite distributive lattice is isomorphic to the lattice of lower sets of a finite partial order. Chapter 6 ...
Lattice shape is an important factor in the accuracy of lattice protein models. Changing lattice shape can dramatically alter the shape of the energetically favorable conformations. [ 2 ] It can also add unrealistic constraints to the protein structure such as in the case of the parity problem where in square and cubic lattices residues of the ...
Unit cell definition using parallelepiped with lengths a, b, c and angles between the sides given by α, β, γ [1]. A lattice constant or lattice parameter is one of the physical dimensions and angles that determine the geometry of the unit cells in a crystal lattice, and is proportional to the distance between atoms in the crystal.
A primitive cell is a unit cell that contains exactly one lattice point. For unit cells generally, lattice points that are shared by n cells are counted as 1 / n of the lattice points contained in each of those cells; so for example a primitive unit cell in three dimensions which has lattice points only at its eight vertices is considered to contain 1 / 8 of each of them. [3]