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The standard file format for storing molecular coordinates in the PDB is called a pdb file and usually has the file extension .pdb. The vast majority of published molecular structures will be distributed in this format, which is a human-readable text-based format that you can open and read in any text editor, such as Microsoft Notepad.
Program database (PDB) is a file format (developed by Microsoft) for storing debugging information about a program (or, commonly, program modules such as a DLL or EXE). PDB files commonly have a .pdb extension. A PDB file is typically created from source files during compilation.
A user of an ACCDE file can only execute VBA code, but not view or modify it. ACCDE takes the place of the MDE file extension..accdr – is a new file extension that enables you to open a database in runtime mode. By simply changing a database's file extension from .accdb to .accdr, you can create a "locked-down" version of your Office Access ...
The Macromolecular Crystallographic Information File (mmCIF) also known as PDBx/mmCIF is a standard text file format for representing macromolecular structure data, developed by the International Union of Crystallography (IUCr) and the Protein Data Bank [1] It is an extension of the Crystallographic Information File (CIF), specifically for macromolecular data, such as proteins and nucleic ...
DTA – Sage Sterling database file; EGT – EGT Universal Document, used to compress sql databases to smaller files, may contain original EGT database style. ESS – EGT SmartSense is a database of files and its compression style. Specific to EGT SmartSense; EAP – Enterprise Architect Project; FDB – Firebird Databases; FDB – Navision ...
The PDB file format was invented in 1972 [2] [3] as a human-readable file that would allow researchers to exchange the atomic coordinates in a given protein through a database system. Its fixed-column width format is limited to 80 or 140 [ 4 ] columns, which was based on the width of the computer punch cards that were previously used to ...
Flat file and file system, Oracle 10G RDB option, WebDAV for attachments TWiki: Peter Thoeny October 1998: 6.1.0 [45] 2018-07-16: JosWiki: GPL: Yes Yes Perl: Flat-file database, RCS, pluggable storage backend UseModWiki: Clifford Adams 22 January 2000: 1.2.1 2017-12-01 AtisWiki GPL: Yes Perl: Flat-file database: Whizfolders: AvniTech 1999: 7.1 ...
162,041 structures in the PDB have a structure factor file. 11,242 structures have an NMR restraint file. 5,774 structures in the PDB have a chemical shifts file. 13,388 structures in the PDB have a 3DEM map file deposited in EM Data Bank. Most structures are determined by X-ray diffraction, but about 7% of structures are determined by protein ...