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An interactive viewer for large phylogenetic trees and networks: All [22] DensiTree A viewer capable of viewing multiple overlaid trees. All [23] FigTree: Simple Java tree viewer able to read newick and nexus tree files. Can be used to color branches and produce vector artwork. All [24] JEvTrace
JavaScript, Python [9] SQLite, Postgresql [9] HuMo-gen: OS Independent [10] JavaScript, PHP [10] ... Family View GEDCOM Histories Individual View Mapping Notes Places ...
A tree view is usually a vertical list of nodes arranged in a tree-like structure. [1] [2] Each node represents a single data item, displayed as an indented line of text or a rectangular box. The indentation (and sometimes a line drawn between nodes) is used to indicate levels of hierarchy. Every treeview has a root node from which all nodes ...
A Quixote application is typically a Python package, a collection of modules grouped into a single directory tree. Quixote then maps a URL to a function or method inside the Python package; the function is then called with the contents of the HTTP request, and the results are returned to the client .
Tree calculation tool calculates phylogenetic tree using BioJava API and lets user draw trees using Archaeopteryx: Software is package of 7 interactive visual tools for multiple sequence alignments. Major focus is manipulating large alignments. Includes MSApad, MSA comparator, MSA reconstruction tool, FASTA generator and MSA ID matrix calculator
Tree: The full input Newick Format for a single tree Subtree: an internal node (and its descendants) or a leaf node Leaf: a node with no descendants Internal: a node and its one or more descendants BranchSet: a set of one or more Branches Branch: a tree edge and its descendant subtree. Name: the name of a node Length: the length of a tree edge.
Archaeopteryx is an interactive computer software program, written in Java, for viewing, editing, and analyzing phylogenetic trees.This type of program can be used for a variety of analyses of molecular data sets, but is particularly designed for phylogenomics.
Simple example of an R-tree for 2D rectangles Visualization of an R*-tree for 3D points using ELKI (the cubes are directory pages). R-trees are tree data structures used for spatial access methods, i.e., for indexing multi-dimensional information such as geographical coordinates, rectangles or polygons.