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  2. List of sequence alignment software - Wikipedia

    en.wikipedia.org/wiki/List_of_sequence_alignment...

    The programme can handle an enormous amount of single-end reads generated by the next-generation Illumina/Solexa Genome Analyzer. cREAL is a simple extension of REAL for aligning short reads obtained from next-generation sequencing to a genome with circular structure. Yes Yes Free, GPL: RMAP

  3. Sentinel node - Wikipedia

    en.wikipedia.org/wiki/Sentinel_node

    Linked list implementations, especially one of a circular, doubly-linked list, can be simplified remarkably using a sentinel node to demarcate the beginning and end of the list. The list starts out with a single node, the sentinel node which has the next and previous pointers point to itself. This condition determines if the list is empty.

  4. List of alignment visualization software - Wikipedia

    en.wikipedia.org/wiki/List_of_alignment...

    This page is a subsection of the list of sequence alignment software. Multiple alignment visualization tools typically serve four purposes: Aid general understanding of large-scale DNA or protein alignments; Visualize alignments for figures and publication; Manually edit and curate automatically generated alignments; Analysis in depth

  5. List of phylogenetic tree visualization software - Wikipedia

    en.wikipedia.org/wiki/List_of_phylogenetic_tree...

    interactive phylogenetic tree visualization with numerical annotation graphs, with SVG or PNG output, implemented in D3.js [44] phylotree.js Javascript phylotree.js is a library that extends the popular data visualization framework D3.js, and is suitable for building JavaScript applications where users can view and interact with phylogenetic trees

  6. Linked list - Wikipedia

    en.wikipedia.org/wiki/Linked_list

    A linked list is a sequence of nodes that contain two fields: data (an integer value here as an example) and a link to the next node. The last node is linked to a terminator used to signify the end of the list. In computer science, a linked list is a

  7. Linked data structure - Wikipedia

    en.wikipedia.org/wiki/Linked_data_structure

    Linked list can be singly, doubly or multiply linked and can either be linear or circular. Basic properties. Objects, called nodes, are linked in a linear sequence. A reference to the first node of the list is always kept. This is called the 'head' or 'front'. [3]

  8. Biological data visualization - Wikipedia

    en.wikipedia.org/wiki/Biological_data_visualization

    Circular phylogenetic tree – Circular trees are often used to illustrate relationships among members of major groups of extant organisms, and these trees may have many terminal taxa. It might seem counterintuitive, but the same information given in a regular phylogenetic tree is given in a circular genetic tree.

  9. Dancing Links - Wikipedia

    en.wikipedia.org/wiki/Dancing_Links

    The idea of DLX is based on the observation that in a circular doubly linked list of nodes, x.left.right ← x.right; x.right.left ← x.left; will remove node x from the list, while x.left.right ← x; x.right.left ← x; will restore x's position in the list, assuming that x.right and x.left have been left unmodified. This works regardless of ...