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  2. pandas (software) - Wikipedia

    en.wikipedia.org/wiki/Pandas_(software)

    Subsets of data can be selected by column name, index, or Boolean expressions. For example, df[df['col1'] > 5] will return all rows in the DataFrame df for which the value of the column col1 exceeds 5. [4]: 126–128 Data can be grouped together by a column value, as in df['col1'].groupby(df['col2']), or by a function which is applied to the index.

  3. BED (file format) - Wikipedia

    en.wikipedia.org/wiki/BED_(file_format)

    BEDTools: program allowing the manipulation of coordinate sets and the extraction of sequences from a BED file. [6] BEDOPS: a suite of tools for fast boolean operations on BED files. [8] BedTk: a faster alternative to BEDTools for a limited and specialized sub-set of operations. [9] covtobed: a tool to convert a BAM file into a BED coverage ...

  4. Zero-based numbering - Wikipedia

    en.wikipedia.org/wiki/Zero-based_numbering

    The indexing expression for a 1-based index would then be a ′ + s × i . {\displaystyle a'+s\times i.} Hence, the efficiency benefit at run time of zero-based indexing is not inherent, but is an artifact of the decision to represent an array with the address of its first element rather than the address of the fictitious zeroth element.

  5. Wide and narrow data - Wikipedia

    en.wikipedia.org/wiki/Wide_and_narrow_data

    Many statistical and data processing systems have functions to convert between these two presentations, for instance the R programming language has several packages such as the tidyr package. The pandas package in Python implements this operation as "melt" function which converts a wide table to a narrow one. The process of converting a narrow ...

  6. Python syntax and semantics - Wikipedia

    en.wikipedia.org/wiki/Python_syntax_and_semantics

    Python sets are very much like mathematical sets, and support operations like set intersection and union. Python also features a frozenset class for immutable sets, see Collection types. Dictionaries (class dict) are mutable mappings tying keys and corresponding values. Python has special syntax to create dictionaries ({key: value})

  7. Serialization - Wikipedia

    en.wikipedia.org/wiki/Serialization

    Flow diagram. In computing, serialization (or serialisation, also referred to as pickling in Python) is the process of translating a data structure or object state into a format that can be stored (e.g. files in secondary storage devices, data buffers in primary storage devices) or transmitted (e.g. data streams over computer networks) and reconstructed later (possibly in a different computer ...

  8. Python (programming language) - Wikipedia

    en.wikipedia.org/wiki/Python_(programming_language)

    Python is a high-level, general-purpose programming language. Its design philosophy emphasizes code readability with the use of significant indentation. [33] Python is dynamically type-checked and garbage-collected. It supports multiple programming paradigms, including structured (particularly procedural), object-oriented and functional ...

  9. Reference counting - Wikipedia

    en.wikipedia.org/wiki/Reference_counting

    It is based on the observation that a cycle can only be isolated when a reference count is decremented to a nonzero value. All objects which this occurs on are put on a roots list, and then periodically the program searches through the objects reachable from the roots for cycles.