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A GraphML file consists of an XML file containing a graph element, within which is an unordered sequence of node and edge elements. Each node element should have a distinct id attribute, and each edge element has source and target attributes that identify the endpoints of an edge by having the same value as the id attributes of those endpoints.
Tulip (software) is a free software in the domain of information visualisation capable of manipulating huge graphs (with more than 1.000.000 elements). yEd, a free Java-based graph editor, supports import from and export to GML. The Graphviz project includes two command-line tools (gml2gv and gv2gml) that can convert to and from the DOT file ...
graph-tool is a Python module for manipulation and statistical analysis of graphs (AKA networks).The core data structures and algorithms of graph-tool are implemented in C++, making extensive use of metaprogramming, based heavily on the Boost Graph Library. [1]
Scribus is an open-source DTP program that can use Graphviz to render graphs by using its internal editor in a special frame type called render frame. [11] Sphinx is a documentation generator that can use Graphviz to embed graphs in documents. TOra a free-software database development and administration GUI, available under the GNU GPL.
Default PDF and file viewer for GNOME; replaces GPdf. Supports addition and removal (since v3.14), of basic text note annotations. CUPS: Apache License 2.0: No No No Yes Printing system can render any document to a PDF file, thus any Linux program with print capability can produce PDF files Pdftk: GPLv2: No Yes Yes
Python will read in almost any format data file Python has write capability for most data formats Windows, Linux, Mac Open source: Python contains several packages relevant for social network analysis: igraph is a library collection for creating and manipulating graphs and analyzing networks. It is written in C and also exists as Python and R ...
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Sphinx converts reStructuredText files into HTML websites and other formats including PDF, EPub, Texinfo and man. reStructuredText is extensible, and Sphinx exploits its extensible nature through a number of extensions – for autogenerating documentation from source code, writing mathematical notation or highlighting source code, etc.