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mzXML is a XML (eXtensible Markup Language) based common file format for proteomics mass spectrometric data. [ 9 ] [ 10 ] This format was developed at the Seattle Proteome Center/Institute for Systems Biology while the HUPO-PSI was trying to specify the standardized mzData format, and is still in use in the proteomics community.
A set of four fluorescently labelled di-base probes compete for ligation to the sequencing primer. Specificity of the di-base probe is achieved by interrogating every 1st and 2nd base in each ligation reaction. Multiple cycles of ligation, detection and cleavage are performed with the number of cycles determining the eventual read length.
The BFAST Web Server can be used to align short reads to reference sequences in both nucleotide space as well as ABI SOLiD color space. Utilities include BFAST alignment, conversion between nucleotide and color space, calculating the a priori power of the alignments, as well as a utility to perform Smith Waterman alignment .
ABBYY FineReader PDF is an optical character recognition (OCR) application developed by ABBYY. [ 2 ] [ 3 ] First released in 1993, the program runs on Microsoft Windows ( Windows 7 or later) and Apple macOS (10.12 Sierra or later).
Data conversion is the conversion of computer data from one format to another. Throughout a computer environment, data is encoded in a variety of ways. For example, computer hardware is built on the basis of certain standards, which requires that data contains, for example, parity bit checks.
These women have ribcage circumferences differing by 2 inches, but when breast tissue is included the measurements are the same at 38 inches. The result is that the latter woman will appear "bustier" than the former due to the apparent difference in bust to hip ratios (narrower shoulders, more prominent breasts) even though they are both ...
Since then, FCS became the standard file format supported by all flow cytometry software and hardware vendors. FCS is a binary file format with three main segments: a text segment containing meta data in keyword/value pairs structures, a data segment usually containing a matrix of detected expression values (so called list mode format), and a ...
A PDF file is organized using ASCII characters, except for certain elements that may have binary content. The file starts with a header containing a magic number (as a readable string) and the version of the format, for example %PDF-1.7. The format is a subset of a COS ("Carousel" Object Structure) format. [24]