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The journal Nucleic Acids Research regularly publishes special issues on biological databases and has a list of such databases. The 2018 issue has a list of about 180 such databases and updates to previously described databases. [2] Omics Discovery Index can be used to browse and search several biological databases.
Bioinformatics uses biology, chemistry, physics, computer science, data science, computer programming, information engineering, mathematics and statistics to analyze and interpret biological data. The process of analyzing and interpreting data can sometimes be referred to as computational biology , however this distinction between the two terms ...
The Database Issue of NAR is freely available, and categorizes many of the public biological databases. A companion database to the issue called the Online Molecular Biology Database Collection lists 1,380 online databases. [15] Other collections of databases exist such as MetaBase and the Bioinformatics Links Collection. [16] [17]
While each field is distinct, there may be significant overlap at their interface, [1] so much so that to many, bioinformatics and computational biology are terms that are used interchangeably. The terms computational biology and evolutionary computation have a similar name, but are not to be confused. Unlike computational biology, evolutionary ...
In the past few decades, leaps in genomic research have led to massive amounts of biological data. As a result, bioinformatics was created as the convergence of genomics, biotechnology, and information technology, while concentrating on biological data. Biological data has also been difficult to define, as bioinformatics is a wide-encompassing ...
Bioinformatics and computational biology are interdisciplinary fields of research, development and application of algorithms, computational and statistical methods for management and analysis of biological data, and for solving basic biological problems.
KEGG (Kyoto Encyclopedia of Genes and Genomes) is a collection of databases dealing with genomes, biological pathways, diseases, drugs, and chemical substances.KEGG is utilized for bioinformatics research and education, including data analysis in genomics, metagenomics, metabolomics and other omics studies, modeling and simulation in systems biology, and translational research in drug development.
Name Description Data type Author(s) Year Cytoscape: Open source software platform for visualizing complex biological networks [57] Systems biology: Cytoscape Team: July 2002 FigTree Java tree viewer able to read multiple tree file formats, color branches, and produce vector artwork: Phylogenetic tree: Andrew Rambaut: Nov 6, 2006 Interactive ...