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Users can download the raw PAE data for all residue pairs in a custom JSON format for further analysis or visualization using a programming language such as Python. The format of the JSON file is as follows:
JSON (JavaScript Object Notation, pronounced / ˈ dʒ eɪ s ən / or / ˈ dʒ eɪ ˌ s ɒ n /) is an open standard file format and data interchange format that uses human-readable text to store and transmit data objects consisting of name–value pairs and arrays (or other serializable values).
Concatenated JSON isn't a new format, it's simply a name for streaming multiple JSON objects without any delimiters. The advantage of this format is that it can handle JSON objects that have been formatted with embedded newline characters, e.g., pretty-printed for human readability. For example, these two inputs are both valid and produce the ...
For example, PKIX uses such notation in RFC 5912. With such notation (constraints on parameterized types using information object sets), generic ASN.1 tools/libraries can automatically encode/decode/resolve references within a document. ^ The primary format is binary, a json encoder is available. [10]
Flow diagram. In computing, serialization (or serialisation, also referred to as pickling in Python) is the process of translating a data structure or object state into a format that can be stored (e.g. files in secondary storage devices, data buffers in primary storage devices) or transmitted (e.g. data streams over computer networks) and reconstructed later (possibly in a different computer ...
jq by default acts as a "stream editor" for JSON inputs, much like the sed utility can be thought of as a "stream editor" for lines of text. However jq has several other modes of operation: it can treat its input from one or more sources as lines of text; it can gather a stream of inputs from a specified source into a JSON array;
reStructuredText (RST, ReST, or reST) is a file format for textual data used primarily in the Python programming language community for technical documentation.. It is part of the Docutils project of the Python Doc-SIG (Documentation Special Interest Group), aimed at creating a set of tools for Python similar to Javadoc for Java or Plain Old Documentation (POD) for Perl.
A Jupyter Notebook document is a JSON file, following a versioned schema, usually ending with the ".ipynb" extension. The main parts of the Jupyter Notebooks are: Metadata, Notebook format and list of cells. Metadata is a data Dictionary of definitions to set up and display the notebook. Notebook Format is a version number of the software.