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  2. List of sequence alignment software - Wikipedia

    en.wikipedia.org/wiki/List_of_sequence_alignment...

    Download as PDF; Printable version; In other projects ... This list of sequence alignment software is a compilation of software tools and web portals used in pairwise ...

  3. MUSCLE (alignment software) - Wikipedia

    en.wikipedia.org/wiki/MUSCLE_(alignment_software)

    MUltiple Sequence Comparison by Log-Expectation (MUSCLE) is a computer software for multiple sequence alignment of protein and nucleotide sequences. It is licensed as public domain. The method was published by Robert C. Edgar in two papers in 2004. The first paper, published in Nucleic Acids Research, introduced the sequence alignment algorithm ...

  4. Help:Download as PDF - Wikipedia

    en.wikipedia.org/wiki/Help:Download_as_PDF

    In the Print/export section select Download as PDF. The rendering engine starts and a dialog appears to show the rendering progress. When rendering is complete, the dialog shows "The document file has been generated. Download the file to your computer." Click the download link to open the PDF in your selected PDF viewer.

  5. List of alignment visualization software - Wikipedia

    en.wikipedia.org/wiki/List_of_alignment...

    The fourth is a great example of how interactive graphical tools enable a worker involved in sequence analysis to conveniently execute a variety if different computational tools to explore an alignment's phylogenetic implications; or, to predict the structure and functional properties of a specific sequence, e.g., comparative modelling.

  6. Installation (computer programs) - Wikipedia

    en.wikipedia.org/wiki/Installation_(computer...

    A soft or digital copy of the piece of software (program) is needed to install it. There are different processes of installing a piece of software (program). Because the process varies for each program and each computer, programs (including operating systems ) often come with an installer , a specialised program responsible for doing whatever ...

  7. FASTA - Wikipedia

    en.wikipedia.org/wiki/FASTA

    The original FASTA program was designed for protein sequence similarity searching. Because of the exponentially expanding genetic information and the limited speed and memory of computers in the 1980s heuristic methods were introduced aligning a query sequence to entire data-bases.

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  9. PHYLIP - Wikipedia

    en.wikipedia.org/wiki/PHYLIP

    The component programs of phylip use several different formats, all of which are relatively simple. Programs for the analysis of DNA sequence alignments, protein sequence alignments, or discrete characters (e.g., morphological data) can accept those data in sequential or interleaved format, as shown below. Sequential format: