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This glossary of biology terms is a list of definitions of fundamental terms and concepts used in biology, the study of life and of living organisms.It is intended as introductory material for novices; for more specific and technical definitions from sub-disciplines and related fields, see Glossary of cell biology, Glossary of genetics, Glossary of evolutionary biology, Glossary of ecology ...
Triadic closure is a good model for how networks will evolve over time. While simple graph theory tends to analyze networks at one point in time, applying the triadic closure principle can predict the development of ties within a network and show the progression of connectivity. [3]
3. Folded cube graph, formed from a hypercube by adding a matching connecting opposite vertices. 4. Halved cube graph, the half-square of a hypercube graph. 5. Partial cube, a distance-preserving subgraph of a hypercube. 6. The cube of a graph G is the graph power G 3. 7. Cubic graph, another name for a 3-regular graph, one in which each vertex ...
Network motifs are recurrent and statistically significant subgraphs or patterns of a larger graph.All networks, including biological networks, social networks, technological networks (e.g., computer networks and electrical circuits) and more, can be represented as graphs, which include a wide variety of subgraphs.
Ribbon diagrams, also known as Richardson diagrams, are 3D schematic representations of protein structure and are one of the most common methods of protein depiction used today. The ribbon depicts the general course and organization of the protein backbone in 3D and serves as a visual framework for hanging details of the entire atomic structure ...
To determine the optimum time spent on a behavior, one can make a graph showing how benefits and costs change with behavior. Optimality is defined as the point where the difference between benefits and costs for a behavior is maximized, which can be done by graphing the benefits and costs on the y-axis and a measure of the behavior on the x-axis.
That means that each individual spiral represents one of the sequences being aligned. 3-dimensional multiple sequence alignment, produced on the 1D-3D Group Alignment Viewer, by RCSB Protein Data Bank. 3D visualization – A common, one-dimensional, representation of a protein sequence is a list of the amino acids that form it. However, 3 ...
The green and blue points are stable, while the green red and magenta are unstable. The black dots indicate semistable fixed points. Besides observing the flow in the phase diagrams, it is also possible to demonstrate the stability of various fixed points using linear stability analysis. First, find the fixed points in the phase portrait by ...