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  2. Gap penalty - Wikipedia

    en.wikipedia.org/wiki/Gap_penalty

    A global alignment performs an end-to-end alignment of the query sequence with the reference sequence. Ideally, this alignment technique is most suitable for closely related sequences of similar lengths. The Needleman-Wunsch algorithm is a dynamic programming technique used to conduct global alignment. Essentially, the algorithm divides the ...

  3. Micralign - Wikipedia

    en.wikipedia.org/wiki/Micralign

    The second-generation Micralign was introduced in 1979. This offered higher resolutions and the ability to work with larger wafers, but also cost much more at $250,000, equivalent to $1,049,519 in 2023. This higher price was offset by its ability to print more chips per wafer, due to the smaller feature sizes.

  4. List of alignment visualization software - Wikipedia

    en.wikipedia.org/wiki/List_of_alignment...

    This page is a subsection of the list of sequence alignment software. Multiple alignment visualization tools typically serve four purposes: Aid general understanding of large-scale DNA or protein alignments; Visualize alignments for figures and publication; Manually edit and curate automatically generated alignments; Analysis in depth

  5. Nomogram - Wikipedia

    en.wikipedia.org/wiki/Nomogram

    A nomogram (from Greek νόμος (nomos) 'law' and γράμμα 'that which is drawn'), also called a nomograph, alignment chart, or abac, is a graphical calculating device, a two-dimensional diagram designed to allow the approximate graphical computation of a mathematical function.

  6. Sequence alignment - Wikipedia

    en.wikipedia.org/wiki/Sequence_alignment

    A more complete list of available software categorized by algorithm and alignment type is available at sequence alignment software, but common software tools used for general sequence alignment tasks include ClustalW2 [45] and T-coffee [46] for alignment, and BLAST [47] and FASTA3x [48] for database searching.

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