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  2. Microbiome - Wikipedia

    en.wikipedia.org/wiki/Microbiome

    The microbiome is defined as a characteristic microbial community occupying a reasonable well-defined habitat which has distinct physio-chemical properties. The microbiome not only refers to the microorganisms involved but also encompass their theatre of activity, which results in the formation of specific ecological niches.

  3. Human microbiome - Wikipedia

    en.wikipedia.org/wiki/Human_microbiome

    Graphic depicting the human skin microbiota, with relative prevalences of various classes of bacteria. The human microbiome is the aggregate of all microbiota that reside on or within human tissues and biofluids along with the corresponding anatomical sites in which they reside, [1] [2] including the gastrointestinal tract, skin, mammary glands, seminal fluid, uterus, ovarian follicles, lung ...

  4. Microbiota - Wikipedia

    en.wikipedia.org/wiki/Microbiota

    The five-year project, best characterized as a feasibility study with a budget of $115 million, tested how changes in the human microbiome are associated with human health or disease. [85] The Earth Microbiome Project (EMP) is an initiative to collect natural samples and analyze the microbial community around the globe.

  5. Machine learning in bioinformatics - Wikipedia

    en.wikipedia.org/wiki/Machine_learning_in...

    For microbiome analysis in 2020 Dang & Kishino [47] developed a novel analysis pipeline. The core of the pipeline is an RF classifier coupled with forwarding variable selection (RF-FVS), which selects a minimum-size core set of microbial species or functional signatures that maximize the predictive classifier performance.

  6. Omics - Wikipedia

    en.wikipedia.org/wiki/Omics

    Multi-omics studies allow for functional analysis of microbiota. [19] Animal models can be used to take more accurate samples of the in situ microbiome. Germ-free animals are used to implant a specific microbiome from another organism to yield a gnotobiotic model. These can be studied to see how it changes under different environmental conditions.

  7. Gut microbiota - Wikipedia

    en.wikipedia.org/wiki/Gut_microbiota

    Gut microbiota, gut microbiome, or gut flora are the microorganisms, including bacteria, archaea, fungi, and viruses, that live in the digestive tracts of animals. [1] [2] The gastrointestinal metagenome is the aggregate of all the genomes of the gut microbiota. [3] [4] The gut is the main location of the human microbiome. [5]

  8. Metagenomics - Wikipedia

    en.wikipedia.org/wiki/Metagenomics

    The metagenomic analysis revealed variations in niche specific abundance among 168 functional modules and 196 metabolic pathways within the microbiome. These included glycosaminoglycan degradation in the gut, as well as phosphate and amino acid transport linked to host phenotype (vaginal pH) in the posterior fornix.

  9. Microorganism - Wikipedia

    en.wikipedia.org/wiki/Microorganism

    A microorganism, or microbe, [a] is an organism of microscopic size, which may exist in its single-celled form or as a colony of cells.. The possible existence of unseen microbial life was suspected from ancient times, such as in Jain scriptures from sixth century BC India.