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An interactive viewer for large phylogenetic trees and networks: All [22] DensiTree A viewer capable of viewing multiple overlaid trees. All [23] FigTree: Simple Java tree viewer able to read newick and nexus tree files. Can be used to color branches and produce vector artwork. All [24] JEvTrace
Kahikatea is a coniferous tree reaching a height of 50–65 m (164–213 ft), making it the tallest New Zealand tree, [3] with a trunk 1–2 m (3.3–6.6 ft) through. It has a 600 year life span and gains maturity after between 250 and 450 years. [4] Near the base of the tree, the roots are typically buttressed and grooved.
In graph theory, a tree is an undirected graph in which any two vertices are connected by exactly one path, or equivalently a connected acyclic undirected graph. [1] A forest is an undirected graph in which any two vertices are connected by at most one path, or equivalently an acyclic undirected graph, or equivalently a disjoint union of trees.
The idea of a tree of life arose from ancient notions of a ladder-like progression from lower into higher forms of life (such as in the Great Chain of Being).Early representations of "branching" phylogenetic trees include a "paleontological chart" showing the geological relationships among plants and animals in the book Elementary Geology, by Edward Hitchcock (first edition: 1840).
Often trees have a fixed (more properly, bounded) branching factor , particularly always having two child nodes (possibly empty, hence at most two non-empty child nodes), hence a "binary tree". Allowing empty trees makes some definitions simpler, some more complicated: a rooted tree must be non-empty, hence if empty trees are allowed the above ...
Ficus religiosa or sacred fig is a species of fig native to the Indian subcontinent [2] and Indochina [3] that belongs to Moraceae, the fig or mulberry family.It is also known as the bodhi tree, [4] bo tree, peepul tree, [2] peepal tree, pipala tree or ashvattha tree (in India and Nepal). [5]
Example of one of two shortest-path trees where the root vertex is the red square vertex. The edges in the tree are indicated with green lines while the two dashed lines are edges in the full graph but not in the tree. The numbers beside the vertices indicate the distance from the root vertex.
Tree calculation tool calculates phylogenetic tree using BioJava API and lets user draw trees using Archaeopteryx: Software is package of 7 interactive visual tools for multiple sequence alignments. Major focus is manipulating large alignments. Includes MSApad, MSA comparator, MSA reconstruction tool, FASTA generator and MSA ID matrix calculator
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