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Linux, macOS, Windows: Apache License 2.0 Apache Software Foundation, myGrid: Ascalaph Designer: Computer program for general purpose molecular modelling for molecular design and simulations. Windows: GPLv2: Agile Molecule AutoDock: Suite of automated docking tools Linux, Mac OS X, SGI IRIX, and Windows: GPL: Scripps Research: Avogadro
DNADynamo is a general purpose DNA and Protein sequence analysis package that can carry out most of the functions required by a standard research molecular biology laboratory DNA and Protein Sequence viewing, editing and annotating; Contig assembly and chromatogram editing including comparison to a reference sequence to identify mutations
For example, users can view statistical attributes and select subsets in the Sequence Data Explorer or use the Distance Data Explorer to inspect pairwise distance data. [11] Another feature of MEGA is the visual specification of domain groups. This allows users to group sequences by a specific characteristic and view subsequent phylogenetic trees.
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