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Programmer's workbenches, documentation tools, version control systems Supports following UML diagrams: Use case diagram, Sequence diagram, Collaboration diagram, Class diagram, Statechart diagram, Activity diagram, Component diagram, Deployment diagram and Package diagram Rational Rose XDE: No Unknown Unknown Unknown Unknown Unknown
JaamSim is a fast and scalable discrete-event simulation software that includes a drag-and-drop user interface, interactive 3D graphics, input and output processing and model development tools and editors. [18] "Out of all the OS DES projects we reviewed, JaamSim is the one with the most impressive 3D user interface that can compete against ...
The fourth is a great example of how interactive graphical tools enable a worker involved in sequence analysis to conveniently execute a variety if different computational tools to explore an alignment's phylogenetic implications; or, to predict the structure and functional properties of a specific sequence, e.g., comparative modelling.
Dia has special objects to help draw entity-relationship models, Unified Modeling Language (UML) diagrams, flowcharts, network diagrams, and simple electrical circuits. It is also possible to add support for new shapes by writing simple XML files, using a subset of Scalable Vector Graphics (SVG) to draw the shape.
Software for ultra fast local DNA sequence motif search and pairwise alignment for NGS data (FASTA, FASTQ). DNA: Hepperle D (www.sequentix.de) 2020 Genoogle Genoogle uses indexing and parallel processing techniques for searching DNA and Proteins sequences. It is developed in Java and open source. Both: Albrecht F: 2015 HMMER
Supports system dynamics, Monte Carlo simulation for uncertainty, array abstraction for handling multidimensional data, linear and non-linear optimization. Uses influence diagrams to define, navigate, and document models. AnyLogic: Proprietary, commercial, free Personal Learning Edition (PLE) for education, formal or not Java: 2020
Open source MySQL, MS SQL Server, PostgreSQL, Oracle, IBM Db2: Windows Visual Studio Extension 2005 Open ModelSphere: Grandite Enterprises - SMBs - personal Open source MS SQL Server, MySQL, PostgreSQL, Oracle, IBM Db2: Windows, macOS, Linux Standalone with Data, UML, and process modeling 2008 Oracle SQL Developer Data Modeler Oracle
Diagram data is normally not contained with the program source, such that the UML tool, at least in the initial step, has to create some random layout of the graphical symbols of the UML notation or use some automatic layout algorithm to place the symbols in a way that the user can understand the diagram. For example, the symbols should be ...