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Aspartic acid: D Asp C 4 H 5 NO 3: 115.02694 115.0874 Glutamic acid: E Glu C 5 H 7 NO 3: 129.04259 129.1140 Phenylalanine: F Phe C 9 H 9 NO 147.06841 147.1739 Glycine: G Gly C 2 H 3 NO 57.02146 57.0513 Histidine: H His C 6 H 7 N 3 O 137.05891 137.1393 Isoleucine: I Ile C 6 H 11 NO 113.08406 113.1576 Lysine: K Lys C 6 H 12 N 2 O 128.09496 128. ...
Amino Acid One Letter Code Hydropathy Score Isoleucine I 4.5 Valine V 4.2 Leucine L 3.8 Phenylalanine F 2.8 Cysteine C 2.5 Methionine M 1.9 Alanine A 1.8 Glycine G -0.4 Threonine T -0.7 Serine S -0.8 Tryptophan W -0.9 Tyrosine Y -1.3 Proline P -1.6 Histidine H -3.2 Glutamic acid E -3.5 Glutamine Q -3.5 Aspartic acid D -3.5 Asparagine N -3.5 ...
Asparagine (symbol Asn or N [2]) is an α-amino acid that is used in the biosynthesis of proteins. It contains an α-amino group (which is in the protonated −NH + 3 form under biological conditions), an α-carboxylic acid group (which is in the deprotonated −COO − form under biological conditions), and a side chain carboxamide ...
In bioinformatics and biochemistry, the FASTA format is a text-based format for representing either nucleotide sequences or amino acid (protein) sequences, in which nucleotides or amino acids are represented using single-letter codes. The format allows for sequence names and comments to precede the sequences.
A codon table can be used to translate a genetic code into a sequence of amino acids. [1] [2] The standard genetic code is traditionally represented as an RNA codon table, because when proteins are made in a cell by ribosomes, it is messenger RNA (mRNA) that directs protein synthesis. [2] [3] The mRNA sequence is determined by the sequence of ...
Protein sequence is typically notated as a string of letters, listing the amino acids starting at the amino-terminal end through to the carboxyl-terminal end. Either a three letter code or single letter code can be used to represent the 22 naturally encoded amino acids, as well as mixtures or ambiguous amino acids (similar to nucleic acid ...
Glutamic acid ball and stick model spinning. Glutamic acid (symbol Glu or E; [4] known as glutamate in its anionic form) is an α-amino acid that is used by almost all living beings in the biosynthesis of proteins. It is a non-essential nutrient for humans, meaning that the human body can synthesize enough for its use.
Deamidation is a chemical reaction in which an amide functional group in the side chain of the amino acids asparagine or glutamine is removed or converted to another functional group. Typically, asparagine is converted to aspartic acid or isoaspartic acid. Glutamine is converted to glutamic acid or pyroglutamic acid (5-oxoproline).