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  2. Ternary plot - Wikipedia

    en.wikipedia.org/wiki/Ternary_plot

    A ternary plot, ternary graph, triangle plot, simplex plot, or Gibbs triangle is a barycentric plot on three variables which sum to a constant. [1] It graphically depicts the ratios of the three variables as positions in an equilateral triangle .

  3. Pyrosequencing - Wikipedia

    en.wikipedia.org/wiki/Pyrosequencing

    Pyrosequencing is a method of DNA sequencing (determining the order of nucleotides in DNA) based on the "sequencing by synthesis" principle, in which the sequencing is performed by detecting the nucleotide incorporated by a DNA polymerase. Pyrosequencing relies on light detection based on a chain reaction when pyrophosphate is released. Hence ...

  4. Truncus (mathematics) - Wikipedia

    en.wikipedia.org/wiki/Truncus_(mathematics)

    For the general truncus form above, the constant a dilates the graph by a factor of a from the x-axis; that is, the graph is stretched vertically when a > 1 and compressed vertically when 0 < a < 1. When a < 0 the graph is reflected in the x-axis as well as being stretched vertically.

  5. DNA read errors - Wikipedia

    en.wikipedia.org/wiki/DNA_read_errors

    In a de Bruijn graph, there is a possibility of 4^k different nodes to make arrangements of a genome. The number of nodes used to create the graph can be reduced in number by considering only the k-mers found within the DNA strand of interest. Given sequence 1, it is possible to determine the nodes of size 7, or 7-mers, that will be in the graph.

  6. Rose (mathematics) - Wikipedia

    en.wikipedia.org/wiki/Rose_(mathematics)

    Graphs of roses are composed of petals.A petal is the shape formed by the graph of a half-cycle of the sinusoid that specifies the rose. (A cycle is a portion of a sinusoid that is one period T = ⁠ 2π / k ⁠ long and consists of a positive half-cycle, the continuous set of points where r ≥ 0 and is ⁠ T / 2 ⁠ = ⁠ π / k ⁠ long, and a negative half-cycle is the other half where r ...

  7. Sequence graph - Wikipedia

    en.wikipedia.org/wiki/Sequence_graph

    Sequence graph, also called an alignment graph, breakpoint graph, or adjacency graph, are bidirected graphs used in comparative genomics. The structure consists of multiple graphs or genomes with a series of edges and vertices represented as adjacencies between segments in a genome [ 1 ] and DNA segments respectively.

  8. Word-representable graph - Wikipedia

    en.wikipedia.org/wiki/Word-representable_graph

    This gives the notion of a k-p-representable graph, and k-11-representable graphs are studied in. [29] Note that 0-11-representable graphs are precisely word-representable graphs. The key results in [29] are that any graph is 2-11-representable and that word-representable graphs are a proper subclass of 1-11-representable graphs. Whether or not ...

  9. Degeneracy (graph theory) - Wikipedia

    en.wikipedia.org/wiki/Degeneracy_(graph_theory)

    In graph theory, a k-degenerate graph is an undirected graph in which every subgraph has at least one vertex of degree at most k: that is, some vertex in the subgraph touches k or fewer of the subgraph's edges. The degeneracy of a graph is the smallest value of k for which it is k-degenerate.

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