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Structure of Heme B Pyrrole itself is not naturally occurring, but many of its derivatives are found in a variety of cofactors and natural products . Common naturally produced molecules containing pyrroles include vitamin B 12 , bile pigments like bilirubin and biliverdin , and the porphyrins of heme , chlorophyll , chlorins , bacteriochlorins ...
Heme D is the site for oxygen reduction to water of many types of bacteria at low oxygen tension. [24] Heme S is related to heme B by having a formyl group at position 2 in place of the 2-vinyl group. Heme S is found in the hemoglobin of a few species of marine worms.
Porphyrins, including heme, the core of hemoglobin; Chlorins, including those at the core of chlorophyll. Cyclic tetrapyrroles having three one-carbon bridges and one direct bond between the pyrroles include: Corrins, including the cores of cobalamins, when complexed with a cobalt ion.
Bile pigments are the breakdown products of heme. The following scheme summarizes the biosynthesis of porphyrins, with references by EC number and the OMIM database. The porphyria associated with the deficiency of each enzyme is also shown: Heme B biosynthesis pathway and its modulators. Major enzyme deficiences are also shown.
The general term protoporphyrin refers to porphine derivatives that have the outer hydrogen atoms in the four pyrrole rings replaced by other functional groups. The prefix proto often means 'first' in science nomenclature (such as carbon protoxide), hence Hans Fischer is thought to have coined the name protoporphyrin as the first class of porphyrins. [3]
A heme group consists of an iron (Fe) ion held in a heterocyclic ring, known as a porphyrin. This porphyrin ring consists of four pyrrole molecules cyclically linked together (by methine bridges) with the iron ion bound in the center. [47]
Heme B or haem B (also known as protoheme IX) is the most abundant heme. [1] Hemoglobin and myoglobin are examples of oxygen transport proteins that contain heme B. The peroxidase family of enzymes also contain heme B. The COX-1 and COX-2 enzymes (cyclooxygenase) of recent fame, also contain heme B at one of two active sites.
Heme B is an essential cofactor in many proteins and enzymes. In particular, heme b plays a key role as the oxygen carrier in hemoglobin in red blood cells and myoglobin in muscle cells. Furthermore, heme B is found in cytochrome b , a key component in Q-cytochrome c oxidoreductase (complex III) in oxidative phosphorylation .