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  2. Burrows–Wheeler transform - Wikipedia

    en.wikipedia.org/wiki/Burrows–Wheeler_transform

    Given an input string S = ^ BANANA $ (step 1 in the table below), rotate it N times (step 2), where N = 8 is the length of the S string considering also the red ^ character representing the start of the string and the red $ character representing the 'EOF' pointer; these rotations, or circular shifts, are then sorted lexicographically (step 3).

  3. Generalized suffix array - Wikipedia

    en.wikipedia.org/wiki/Generalized_suffix_array

    It is a lexicographically sorted array of all suffixes of each string in the set . In the array, each suffix is represented by an integer pair ( i , j ) {\displaystyle (i,j)} which denotes the suffix starting from position j {\displaystyle j} in s i {\displaystyle s_{i}} .

  4. Lexicographic order - Wikipedia

    en.wikipedia.org/wiki/Lexicographic_order

    Given two different words of the same length, say a = a 1 a 2...a k and b = b 1 b 2...b k, the order of the two words depends on the alphabetic order of the symbols in the first place i where the two words differ (counting from the beginning of the words): a < b if and only if a i < b i in the underlying order of the alphabet A.

  5. Radix sort - Wikipedia

    en.wikipedia.org/wiki/Radix_sort

    In computer science, radix sort is a non-comparative sorting algorithm.It avoids comparison by creating and distributing elements into buckets according to their radix.For elements with more than one significant digit, this bucketing process is repeated for each digit, while preserving the ordering of the prior step, until all digits have been considered.

  6. Suffix array - Wikipedia

    en.wikipedia.org/wiki/Suffix_array

    In computer science, a suffix array is a sorted array of all suffixes of a string. It is a data structure used in, among others, full-text indices, data-compression algorithms, and the field of bibliometrics. Suffix arrays were introduced by Manber & Myers (1990) as a simple, space efficient alternative to suffix trees.

  7. Sorting - Wikipedia

    en.wikipedia.org/wiki/Sorting

    Insertion sort: Scan successive elements for an out-of-order item, then insert the item in the proper place. Selection sort: Find the smallest (or biggest) element in the array, and put it in the proper place. Swap it with the value in the first position. Repeat until array is sorted. Quick sort: Partition the array into two segments. In the ...

  8. LCP array - Wikipedia

    en.wikipedia.org/wiki/LCP_array

    It stores the lengths of the longest common prefixes (LCPs) between all pairs of consecutive suffixes in a sorted suffix array. For example, if A := [aab, ab, abaab, b, baab] is a suffix array, the longest common prefix between A[1] = aab and A[2] = ab is a which has length 1, so H[2] = 1 in the LCP array H.

  9. Heapsort - Wikipedia

    en.wikipedia.org/wiki/Heapsort

    The heapsort algorithm can be divided into two phases: heap construction, and heap extraction. The heap is an implicit data structure which takes no space beyond the array of objects to be sorted; the array is interpreted as a complete binary tree where each array element is a node and each node's parent and child links are defined by simple arithmetic on the array indexes.