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A secretory protein is any protein, whether it be endocrine or exocrine, which is secreted by a cell. Secretory proteins include many hormones , enzymes , toxins , and antimicrobial peptides . Secretory proteins are synthesized in the endoplasmic reticulum.
Secretomics is a type of proteomics which involves the analysis of the secretome—all the secreted proteins of a cell, tissue or organism. [1] Secreted proteins are involved in a variety of physiological processes, including cell signaling and matrix remodeling, but are also integral to invasion and metastasis of malignant cells. [2]
predicted secreted bacterial proteins. Organisms: bacteria: Contact; Research center: ... Effective is a database of predicted bacterial secreted proteins. [1] See also
The secretome is the set of proteins expressed by an organism and secreted into the extracellular space.In humans, this subset of the proteome encompasses 13-20% of all proteins, including cytokines, growth factors, extracellular matrix proteins and regulators, and shed receptors.
Bacterial Effector Proteins and their domains/motifs (from Paul Dean's lab) T3DB – A database of Type 3 Secretion System (T3SS) proteins [46] T3SE – T3SS Database; BEAN 2.0: an integrated web resource for the identification and functional analysis of type III secreted effectors [47]
CATH database [3] Structural Classification of Proteins database (SCOP) [4] Both classification schemes are based on a hierarchy of fold types. At the top level are all alpha proteins (domains consisting of alpha helices), all beta proteins (domains consisting of beta sheets), and mixed alpha helix/beta sheet proteins.
UniProt Archive (UniParc) is a comprehensive and non-redundant database, which contains all the protein sequences from the main, publicly available protein sequence databases. [17] Proteins may exist in several different source databases, and in multiple copies in the same database.
Secreted protein database entry Human ADAMTS13 genome location and ADAMTS13 gene details page in the UCSC Genome Browser . Overview of all the structural information available in the PDB for UniProt : Q76LX8 (A disintegrin and metalloproteinase with thrombospondin motifs 13) at the PDBe-KB .