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Download as PDF; Printable version; ... Circular permutation in proteins; Claw-free permutation; ... Skew and direct sums of permutations;
The permutation by duplication mechanism for producing a circular permutation. First, a gene 1-2-3 is duplicated to form 1-2-3-1-2-3. Next, a start codon is introduced before the first domain 2 and a stop codon after the second domain 1, removing redundant sections and resulting in a circularly permuted gene 2-3-1.
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A cyclic permutation consisting of a single 8-cycle. There is not widespread consensus about the precise definition of a cyclic permutation. Some authors define a permutation σ of a set X to be cyclic if "successive application would take each object of the permuted set successively through the positions of all the other objects", [1] or, equivalently, if its representation in cycle notation ...
There are a few equivalent ways to state this definition. A cyclic order on X is the same as a permutation that makes all of X into a single cycle, which is a special type of permutation - a circular permutation. Alternatively, a cycle with n elements is also a Z n-torsor: a set with a free transitive action by a finite cyclic group. [1]
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