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An alignment-free bioinformatics procedure to infer distance-based phylogenetic trees from genome assemblies, specifically designed to quickly infer trees from genomes belonging to the same genus MinHash -based pairwise genome distance, Balanced Minimum Evolution (BME), ratchet-based BME tree search, Rate of Elementary Quartets
Spheciospongia vesparium, commonly known as the loggerhead sponge, [2] is a species of sea sponge belonging to the family Clionaidae. While it is highly toxic to many fish, this sponge is eaten by certain angelfish and is known to form part of the diet of the hawksbill sea turtle ( Eretmochelys imbricata ).
Multiple species suggestions are typically provided with the suggestion that the software guesses to be most likely is at the top of the list. A broader taxon such as a genus or family is commonly provided if the model is unsure of the species.
Taxonomic databases digitize scientific biodiversity data and provide access to taxonomic data for research. [1] Taxonomic databases vary in breadth of the groups of taxa and geographical space they seek to include, for example: beetles in a defined region, mammals globally, or all described taxa in the tree of life. [2]
Some species-focused databases attempt to compile comprehensive data about particular species , while others focus on particular species attributes, such as checklists of species in a given area (FEOW) or the conservation status of species (CITES or IUCN Red List). Nomenclators act as summaries of taxonomic revisions and set a key between ...
This is a list of free and open-source software for geological data handling and interpretation. The list is split into broad categories, depending on the intended use of the software and its scope of functionality. Notice that 'free and open-source' requires that the source code is available and users are given a free software license.
Automated species identification is a method of making the expertise of taxonomists available to ecologists, parataxonomists and others via digital technology and artificial intelligence. Today, most automated identification systems rely on images depicting the species for the identification. [ 1 ]
Biodiversity informatics is the application of informatics techniques to biodiversity information, such as taxonomy, biogeography or ecology.It is defined as the application of Information technology technologies to management, algorithmic exploration, analysis and interpretation of primary data regarding life, particularly at the species level organization. [1]