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Human Protein Atlas (HPA [10]): a public database with expression profiles of human protein coding genes both on mRNA and protein level in tissues, cells, subcellular compartments, and cancer tumors. Legume Information System (LIS): genomic database for the legume family [11]
Sources: [2] [3] Consider a database containing data from a census. A single record represents a single household, and all records are grouped into buckets. All records in a bucket can be indexed by either their city (which is the same for all records in the bucket), and the streets in that city whose names begin with the same letter.
The database schema is the structure of a database described in a formal language supported typically by a relational database management system (RDBMS). The term " schema " refers to the organization of data as a blueprint of how the database is constructed (divided into database tables in the case of relational databases ).
A database object is a structure for storing, managing and presenting application- or user-specific data in a database. Depending on the database management system (DBMS), many different types of database objects can exist. [1] [2] The following is a list of the most common types of database objects found in most relational databases (RDBMS):
The following is provided as an overview of and topical guide to databases: Database – organized collection of data, today typically in digital form. The data are typically organized to model relevant aspects of reality (for example, the availability of rooms in hotels), in a way that supports processes requiring this information (for example, finding a hotel with vacancies).
Single-cell omics technologies has extended beyond the transcriptome to profile diverse physical-chemical properties at single-cell resolution, including whole genomes/exomes, DNA methylation, chromatin accessibility, histone modifications, epitranscriptome (e.g., mRNAs, microRNAs, tRNAs, lncRNAs), proteome, phosphoproteome, metabolome, and more.
A hierarchical database model is a data model in which the data is organized into a tree-like structure. The data are stored as records which is a collection of one or more fields . Each field contains a single value, and the collection of fields in a record defines its type .
Database design is the organization of data according to a database model. The designer determines what data must be stored and how the data elements interrelate. With this information, they can begin to fit the data to the database model. [1] A database management system manages the data accordingly.