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The Saccharomyces Genome Database (SGD) is a scientific database of the molecular biology and genetics of the yeast Saccharomyces cerevisiae, which is commonly known as baker's or budding yeast. [1] Further information is located at the Yeastract curated repository.
Legume Information System (LIS): genomic database for the legume family [11] Personal Genome Project: human genomes of 100,000 volunteers from around the world; RGD (Rat Genome Database): genomic and phenotype data for Rattus norvegicus; Saccharomyces Genome Database: [12] genome of the yeast model organism; SNPedia
Saccharomyces cerevisiae (/ ˌ s ɛr ə ˈ v ɪ s i. iː /) (brewer's yeast or baker's yeast) is a species of yeast (single-celled fungal microorganisms). The species has been instrumental in winemaking , baking , and brewing since ancient times.
Saccharomyces is a genus of fungi that includes many species of yeasts. Saccharomyces is from Greek σάκχαρον (sugar) and μύκης (fungus) and means sugar fungus . Many members of this genus are considered very important in food production where they are known as brewer's yeast, baker's yeast and sourdough starter among others.
YEASTRACT (Yeast Search for Transcriptional Regulators And Consensus Tracking) is a curated repository of more than 48000 regulatory associations between transcription factors (TF) and target genes in Saccharomyces cerevisiae, based on more than 1200 bibliographic references. [1]
Associations with plants, including Saccharomyces cerevisiae with grapes [15] Plant parasitism (e.g. cotton boll rot by Eremothecium ashbyi, Eremothecium gossypii as pathogen on coffee, soybean and other crops) [2] Saprotrophism on leaves and decaying wood (e.g. Ogataea) [16] Human pathogens (e.g. species of Candida and Meyerozyma) [8] [9]
Saccharomyces Genome Database is a National Institute of Health-funded research project on the Web. It provides curation of all published results on budding yeast (aka. bakers, brewers, and wine yeast) genes and their products. Its current URL is yeastgenome.org. [165] [166]
The BioCyc database collection is an assortment of organism specific Pathway/Genome Databases (PGDBs) that provide reference to genome and metabolic pathway information for thousands of organisms. [1] As of July 2023, there were over 20,040 databases within BioCyc. [2]