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  2. Protein Data Bank - Wikipedia

    en.wikipedia.org/wiki/Protein_Data_Bank

    In October 1998, [11] the PDB was transferred to the Research Collaboratory for Structural Bioinformatics (RCSB); [12] the transfer was completed in June 1999. The new director was Helen M. Berman of Rutgers University (one of the managing institutions of the RCSB, the other being the San Diego Supercomputer Center at UC San Diego ). [ 13 ]

  3. Worldwide Protein Data Bank - Wikipedia

    en.wikipedia.org/wiki/Worldwide_Protein_Data_Bank

    Research Collaboratory for Structural Bioinformatics Protein Database (RCSB PDB) Protein Data Bank in Europe (PDBe) Protein Data Bank Japan (PDBj) Biological Magnetic Resonance Data Bank (BMRB) Electron Microscopy Data Bank (EMDB). The wwPDB was founded in 2003 by RCSB PDB (USA), PDBe (Europe) and PDBj (Japan). In 2006 BMRB (USA) joined the wwPDB.

  4. List of biological databases - Wikipedia

    en.wikipedia.org/wiki/List_of_biological_databases

    Protein Data Bank: Protein DataBank in Europe (PDBe), [18] ProteinDatabank in Japan (PDBj), [19] Research Collaboratory for Structural Bioinformatics (RCSB) [20] (PDB) Protein structure databases Structural Classification of Proteins (SCOP) Protein structure databases CATH database: Protein structure databases ModBase: Sali Lab, UCSF

  5. Protein structure database - Wikipedia

    en.wikipedia.org/wiki/Protein_structure_database

    The Protein Data Bank (PDB) was established in 1971 as the central archive of all experimentally determined protein structure data. Today the PDB is maintained by an international consortia collectively known as the Worldwide Protein Data Bank (wwPDB).

  6. Helen M. Berman - Wikipedia

    en.wikipedia.org/wiki/Helen_M._Berman

    Helen Miriam Berman is a Board of Governors Professor of Chemistry and Chemical Biology at Rutgers University and a former director of the RCSB Protein Data Bank (one of the member organizations of the Worldwide Protein Data Bank). A structural biologist, her work includes structural analysis of protein-nucleic acid complexes, and the role of ...

  7. Protein Data Bank (file format) - Wikipedia

    en.wikipedia.org/wiki/Protein_Data_Bank_(file...

    The Protein Data Bank (PDB) file format is a textual file format describing the three-dimensional structures of molecules held in the Protein Data Bank, now succeeded by the mmCIF format. The PDB format accordingly provides for description and annotation of protein and nucleic acid structures including atomic coordinates, secondary structure ...

  8. Template:Protein Data Bank link - Wikipedia

    en.wikipedia.org/wiki/Template:Protein_Data_Bank...

    This page was last edited on 10 January 2025, at 19:38 (UTC).; Text is available under the Creative Commons Attribution-ShareAlike 4.0 License; additional terms may apply.

  9. European Bioinformatics Institute - Wikipedia

    en.wikipedia.org/wiki/European_Bioinformatics...

    The data are typically obtained by X-ray crystallography or nuclear magnetic resonance spectroscopy (NMR spectroscopy), and submitted manually by structural biologists worldwide through PDB member organizations – PDBe, RCSB, PDBj and BMRB. The database can be accessed through the webpages of its members, including PDBe (housed at the EMBL-EBI).