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  2. DNA annotation - Wikipedia

    en.wikipedia.org/wiki/DNA_annotation

    A variety of software tools have been developed that allow scientists to view and share genome annotations, such as MAKER. Genome annotation is an active area of investigation and involves a number of different organizations in the life science community which publish the results of their efforts in publicly available biological databases ...

  3. Bioconductor - Wikipedia

    en.wikipedia.org/wiki/Bioconductor

    Genome annotation. The Bioconductor project provides software for associating microarray and other genomic data in real time to biological metadata from web databases such as GenBank, LocusLink and PubMed (annotate package). Functions are also provided for incorporating the results of statistical analysis in HTML reports with links to ...

  4. BASys - Wikipedia

    en.wikipedia.org/wiki/BASys

    BASys (Bacterial Annotation System) is a freely available web server that can be used to perform automated, comprehensive annotation of bacterial genomes. [2] With the advent of next generation DNA sequencing it is now possible to sequence the complete genome of a bacterium (typically ~4 million bases) within a single day.

  5. Genomic annotation - Wikipedia

    en.wikipedia.org/wiki/Genomic_annotation

    Genomic annotation can refer to: DNA annotation; SNP annotation; See also. Vertebrate Genome Annotation Project This page was last edited on 16 ...

  6. SNP annotation - Wikipedia

    en.wikipedia.org/wiki/SNP_annotation

    Single nucleotide polymorphism annotation (SNP annotation) is the process of predicting the effect or function of an individual SNP using SNP annotation tools. In SNP annotation the biological information is extracted, collected and displayed in a clear form amenable to query.

  7. MicrobesOnline - Wikipedia

    en.wikipedia.org/wiki/MicrobesOnline

    The homepage of MicrobesOnline is the portal for accessing its functions, which includes six main sections: the top navigation elements, a genome selector, examples of the tutorial based on E.coli K-12, a link to the Genome-Linked Application for Metabolic Maps (GLAMM), website highlights and the “about MicrobesOnline” list.

  8. List of gene prediction software - Wikipedia

    en.wikipedia.org/wiki/List_of_gene_prediction...

    Fast detection of coding regions in short genome sequences: Dragon Promoter Finder Program to recognize vertebrate RNA polymerase II promoters: Vertebrates [7] EasyGene: The gene finder is based on a hidden Markov model (HMM) that is automatically estimated for a new genome. Prokaryotes [8] [9] EuGene: Integrative gene finding: Prokaryotes ...

  9. Functional genomics - Wikipedia

    en.wikipedia.org/wiki/Functional_genomics

    The ENCODE (Encyclopedia of DNA elements) project is an in-depth analysis of the human genome whose goal is to identify all the functional elements of genomic DNA, in both coding and non-coding regions. Important results include evidence from genomic tiling arrays that most nucleotides are transcribed as coding transcripts, non-coding RNAs, or ...