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  2. Sticky and blunt ends - Wikipedia

    en.wikipedia.org/wiki/Sticky_and_blunt_ends

    The simplest DNA end of a double stranded molecule is called a blunt end. Blunt ends are also known as non-cohesive ends. In a blunt-ended molecule, both strands terminate in a base pair. Blunt ends are not always desired in biotechnology since when using a DNA ligase to join two molecules into one, the yield is significantly lower with blunt ...

  3. Restriction site - Wikipedia

    en.wikipedia.org/wiki/Restriction_site

    Some restriction enzymes cut DNA at a restriction site in a manner which leaves no overhang, called a blunt end. [2] Blunt ends are much less likely to be ligated by a DNA ligase because the blunt end doesn't have the overhanging base pair that the enzyme can recognize and match with a complementary pair. [3]

  4. Restriction enzyme - Wikipedia

    en.wikipedia.org/wiki/Restriction_enzyme

    Recognition sequences in DNA differ for each restriction enzyme, producing differences in the length, sequence and strand orientation (5' end or 3' end) of a sticky-end "overhang" of an enzyme restriction. [31] Different restriction enzymes that recognize the same sequence are known as neoschizomers. These often cleave in different locales of ...

  5. List of restriction enzyme cutting sites - Wikipedia

    en.wikipedia.org/wiki/List_of_restriction_enzyme...

    A restriction enzyme or restriction endonuclease is a special type of biological macromolecule that functions as part of the "immune system" in bacteria.One special kind of restriction enzymes is the class of "homing endonucleases", these being present in all three domains of life, although their function seems to be very different from one domain to another.

  6. Fragmentation (cell biology) - Wikipedia

    en.wikipedia.org/wiki/Fragmentation_(cell_biology)

    Many restriction enzymes make staggered cuts in the two DNA strands at their recognition site, which generates fragments with a single stranded "tail" that overhangs at both ends, called a sticky end. Restriction enzymes can also make straight cuts in the two DNA strands at their recognition site, which generates blunt ends. [4] 2. DNA ligase

  7. Ligation (molecular biology) - Wikipedia

    en.wikipedia.org/wiki/Ligation_(molecular_biology)

    Restriction enzymes can generate a wide variety of ends in the DNA they digest, but in cloning experiments most commonly-used restriction enzymes generate a 4-base single-stranded overhang called the sticky or cohesive end (exceptions include NdeI which generates a 2-base overhang, and those that generate blunt ends). These sticky ends can ...

  8. Subcloning - Wikipedia

    en.wikipedia.org/wiki/Subcloning

    The production site is flanked by two restriction enzyme cutting sites "A" and "B" with incompatible sticky ends. The mammalian DNA does not come with these restriction sites, so they are built in by overlap extension PCR. The primers are designed to put the restriction sites carefully, so that the coding of the protein is in-frame, and a ...

  9. BglII - Wikipedia

    en.wikipedia.org/wiki/BglII

    The principal function of restriction enzymes is the protection of the host genome against foreign DNA, but they may also have some involvement in recombination and transposition. [ 1 ] Like most type II restriction enzymes, BglII consists of two identical subunits that form a homodimer around the DNA double helix.